Variovorax sp. PAMC 28711: AX767_15475
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Entry
AX767_15475 CDS
T04325
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vaa
Variovorax sp. PAMC 28711
Pathway
vaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AX767_15475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vaa03019
]
AX767_15475
Enzymes [BR:
vaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AX767_15475
Messenger RNA biogenesis [BR:
vaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AX767_15475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AMM25601
UniProt:
A0A126ZGP1
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All DBs
Position
3200461..3202059
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AA seq
532 aa
AA seq
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MIKNFIDKLLGKSPEAPRFGKRQEVAASVHGIDPALVDERAKNVVTTLQQAGYEAYVVGG
AVRDLLLGLRPKDFDVATNATPEQVKSLFRRAFIIGRRFRIVHVVYGRGREHEVIEVSTF
RAYMDNAAAEQVKGNERTSKGELAGMTHAVDSSGRVLRDNVWGPQDEDAARRDFTVNAMY
YDPANQIVVDYHNGIRDAKKLTLRMIGDPATRYREDPVRIIRAIRFSAKLAALGFSMEPK
TAAPLIESSKLLADVPQSRLFDEMLKLLQTGHAIATVAQLRKLGLAKGIYPLLDVVVERA
DSPFVNAALQDTDRRVGEGKPVAPSFLLACVLWADVRDGWAARIEGRHGQRGQPAYPALQ
DAIDDVFNSRIGDVSGRGKLAADMREIWMMQPRFDKRSGATPYSLVEQARFRAAFDFMRL
RADVGEVSEAIGEWWQEFSTADDLRRQDLMDQVRDEQKKGPRVRVRAPQAATAQPPQRDS
AESEEDDEVSADAVAVPPDGEAAAPRKRRRRRKPRTGGEGGGPDEGGDAPDA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaatttcatcgacaaactgcttgggaaatcgcccgaagcgccccgtttcggc
aaacgacaggaagtcgcagcctctgtccacgggatcgacccggcactcgtcgatgagcgc
gccaagaacgtcgtcacgaccttgcagcaagccggctacgaggcgtacgtggtaggcggt
gcggtgcgcgacctgctgctcggcctgcgaccgaaagacttcgacgtggcgacgaacgcg
acgccggagcaggtcaagagcctgttccggcgcgccttcatcattggccggcgctttcgc
atcgtgcacgtggtgtacggccgcgggcgcgaacacgaagtgatcgaggtgtcgacgttc
cgtgcctacatggacaacgccgcggccgaacaggtcaagggcaacgagcgcaccagcaag
ggcgaactggccggaatgacgcacgcggtcgattcgagcggccgcgtgctgcgcgacaac
gtctggggcccgcaggacgaggacgccgcacgccgcgacttcactgtgaacgcgatgtac
tacgacccggcgaaccagatcgtggtcgattaccacaacggcatccgcgacgcgaagaag
ctcacgctgcgcatgatcggcgaccccgccacgcgctaccgcgaagacccggtgcgcatc
attcgcgcgatccgcttctcggccaagctcgccgcgctcggtttcagcatggagccgaaa
accgccgcgccgctcatcgaatcgagcaagctgctggccgacgtgccgcagagccggctc
ttcgacgaaatgctcaagctgctgcaaacgggccatgcgatcgccaccgtcgcgcagctg
cgcaagctcggcctggccaagggcatttacccgttgctcgacgtggttgtcgagcgggcc
gacagtcctttcgtcaacgcagcgttgcaagacacagaccgtcgcgttggcgaaggcaag
ccagtggcgccgagcttcctgctcgcctgcgtgctgtgggccgatgtgcgtgacggctgg
gctgcccgcatcgaaggacggcacggccagcgcggccagcctgcctacccggcgttgcag
gacgcgatcgacgatgtgttcaattcacgcatcggcgatgtgtcgggccgcggcaagctg
gccgccgacatgcgcgagatctggatgatgcagccgcgcttcgacaagcgcagcggcgcc
acgccatacagcctggtcgagcaggcccgctttcgcgcggccttcgatttcatgcggttg
cgggccgacgtgggcgaagtgagcgaagcgatcggcgagtggtggcaggagttcagcacg
gccgatgacctgcgtcgccaggatttgatggaccaggtccgtgacgagcagaaaaagggt
ccgcgcgtgcgggtccgcgcgccacaagcggcgacagcgcagccgcctcagcgcgactcc
gcggagtccgaagaagacgacgaggtttcggcagacgccgtggccgtgccgcccgatggg
gaagccgcggcgccgcgcaagcgccgccggcgccggaagccacgcacgggcggtgagggc
ggtggacctgacgagggcggcgacgcgcccgacgcatga
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