Variovorax sp. PAMC 28711: AX767_16355
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Entry
AX767_16355 CDS
T04325
Name
(GenBank) hypothetical protein
KO
K11690
TRAP-type transport system large permease protein
Organism
vaa
Variovorax sp. PAMC 28711
Pathway
vaa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AX767_16355
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaa02000
]
AX767_16355
Transporters [BR:
vaa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AX767_16355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
CitMHS
Motif
Other DBs
NCBI-ProteinID:
AMM25750
UniProt:
A0A126ZF37
LinkDB
All DBs
Position
complement(3394854..3396149)
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AA seq
431 aa
AA seq
DB search
MTIPLLILCISFTVFLLLGVPVAFSIGLSALATLLYEGLPLAVGFQQMTSGMGIFSFLAI
PFFIFAGELMLYGGIADRIVDFARSLVGHVRGGLGMSNVVACTLFGGVSGSPVADVSAMG
AVMIPMMKKEGYHADYAVNVTTHAALVGALMPTSHNLIIYSLAAGGKVSIAALILAALLP
AAVLTISNLAAAYLVAVKRGYPAGTFPGWAIVWRCFAAAMPGLFIVVLILGGILSGVFTA
TESAAVAVLYALVLTIVVYRTLKWEHFIKAASKAVRTTGVILLLIGISSTFGYLISLYGV
AELTGQMLSQITSTPWMIFLLINVILFVLGTFLDMAATILLCTPIFLPIAQQYGMSSVQF
GIVMLINCALGLNTPPVGTTQFVGCAIGGVSVGTVMKTIWPFYGALIFALGVVTFVPAFS
TWLPSLFMVVK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgacgattccactgctgatcctctgtatctcgttcactgtcttcctgctgctcggcgtg
ccggtggcgttctcgatcggcctgtcggccctggccacactgctctacgaaggcctgccg
ctggcggtcggcttccagcagatgacctcgggcatgggcatcttctccttcttggcgatc
ccgttcttcatcttcgcgggcgagctcatgctgtacggcggcatcgccgaccgcatcgtc
gacttcgcgcgcagcctggtcggccacgtgcgcggcggcctcggcatgtcgaacgtggtg
gcgtgcacgctgttcggtggcgtgtcgggctcgccggtggccgacgtgtcggcgatgggc
gcggtgatgatcccgatgatgaagaaggagggttatcacgccgactacgcggtcaacgtg
acgacccatgcggcactggtgggcgcgctcatgccgaccagccacaacctcatcatctat
tcgctcgctgccggcggcaaggtgtcgatcgcggcgctgattctcgcggcgctgttgccc
gccgcggtcctcacgatcagcaacctggcagcggcctacctcgtggcggtgaagcgcggc
tacccggccggcaccttccccggatgggccatcgtgtggcgctgctttgcggccgccatg
ccgggcctgttcatcgtcgtgctgatcctcggcggcattttgtcgggcgtgttcaccgcg
accgaatcggcggcggtggcggtgctttatgcgctggtgctgacgatcgtggtgtaccgc
acgctgaagtgggaacacttcatcaaggcggcatcgaaggcggtgcgcaccaccggcgtg
atcctgctgctcatcggtatttcaagcaccttcggctacctcatcagcctctacggcgtg
gccgagctcaccggccagatgctctcgcagatcaccagcacgccgtggatgattttcctg
ctcatcaacgtcatcctcttcgtgctcggcaccttcctggacatggccgcgaccatcctg
ctgtgcacgccgatcttcctgccgatcgcgcagcagtacggcatgagctcggttcagttc
ggcatcgtgatgctcatcaattgcgcgctgggtctcaacacgccgccagtgggcacaacg
cagttcgtcggctgtgcgatcggcggtgtgtcggtcggcacggtcatgaagacgatctgg
cctttctacggcgcgctcatcttcgcgctcggcgtggtgactttcgtgcccgccttctcg
acctggctcccgagcctcttcatggtggtgaagtga
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