Variovorax sp. PAMC 28711: AX767_16705 Help Entry AX767_16705       CDS       T04325                                  Name (GenBank) RNA polymerase subunit sigma   KO K03086   RNA polymerase primary sigma factor Organism vaa  Variovorax sp. PAMC 28711 Pathway vaa02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:vaa00001]  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     AX767_16705  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vaa03021]     AX767_16705 Transcription machinery [BR:vaa03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      AX767_16705 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma70_ner Sigma70_r1_1 Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r1_2 SPO22 MscS_porin Motif Other DBs NCBI-ProteinID:  AMM25811 LinkDB All DBs Position complement(3464014..3466386) Genome browser AA seq 790 aa AA seqDB search MPSSKKPAVSASKSAAKKPLKTAVAPRATASKTGAAASKPAAATKVKTLPTTKSNPSADL KKPAATAVASTTAAPAAKKVGRPPKAAAADGAAAPATGAKRGRKPKAGSDDASANDVDMS DIEDDLAGEPVVASTEEKVKPLRMKISKAKERALMKEFGLDETVLSEEDMAKRRSRLKTL ITLGKTRGYLTHGEISDHLPDKLVDAETMEVVVTMLNDMGVAVYEQTPDAETLLLNNTAP TAATVEEAEEEAEAALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEIAKRIEGGLM AMMEAISASPATIAEILRQANEIRAGIGKAVITTFVDGFSNPNEADDYVAEEDFDEFDAE DDDDGKGGSKALTKKLEELKRDALERFDRMAVMFEKIHKIYEKEGYGTPAYAKAQAALSE ELMTIRFTAKTIEKLCDMVRNQVDDVRKKERELRRIIVDKCGFPQEDFIRDFSGYDKNGK RVPSHLLDQKWVEKQAASGKPWSVVLARNIPPVQELQQKLADIQARVVVPLTQLKDINKR MNEGEYSSRAAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRG YKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQEFGFEPDAGILA AKMEIPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDSSNTAPIEAAMQAGLRDVV KDILDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQIEAKALRKLKHPSRS DKLRSFIDTL NT seq 2373 nt NT seq  +upstreamnt  +downstreamnt atgcccagttcaaagaagcctgccgtgtccgccagcaaatccgctgccaaaaaaccgttg aagacggctgtcgcaccccgtgcgaccgccagcaaaacgggggccgccgcgtccaaaccg gctgccgcaacgaaagtgaaaaccttgcccacgacgaaatcgaatccttccgcggacctc aagaagcccgccgccaccgctgtcgcatcgacgaccgccgcacccgccgccaagaaagtc ggccgtccgcccaaggctgctgcagccgatggtgccgctgcacctgccaccggcgccaag cgcggccgcaagcccaaggccggcagcgatgacgcgtccgccaacgacgtcgacatgtcc gacatcgaagacgacctggccggtgagcccgtcgtcgcgtcgaccgaagaaaaggtcaag ccgctgcgcatgaagatcagcaaggcgaaggaacgcgccttgatgaaggaattcggcctg gacgaaaccgtcctctccgaagaagacatggccaagcgccgctcgcgcctgaagaccctg atcacgctcggcaagacgcgcggctacctgacgcacggcgaaatctccgaccacttgccc gacaagctggtcgacgccgagaccatggaagtcgtggtcaccatgctcaacgacatgggc gtggccgtctacgagcagacgcccgatgcggaaaccctgctcctgaacaacaccgcgccg accgccgcgaccgtcgaagaagccgaagaagaagccgaagccgcgctctccacggtggac agcgaattcggccgcaccaccgaccccgttcgcatgtacatgcgcgaaatgggcacggtc gagctgctgacgcgcgaaggcgaaatcgaaatcgccaagcgcatcgaaggcggcctgatg gccatgatggaagcgatctccgcatcgcccgccaccatcgccgagatcctgcgccaggcc aatgaaatccgcgccggtatcggcaaggcggtcatcacgaccttcgtcgacggtttctcc aaccccaacgaggccgacgactatgtggccgaagaagacttcgacgagttcgatgccgaa gacgacgacgacggcaagggcggctccaaggcgctgaccaagaagctcgaagaactcaag cgcgatgcgctcgagcgtttcgaccgcatggccgtcatgttcgagaagatccacaagatc tacgagaaggaaggctacggcacgccggcgtacgccaaggcgcaagcggccctgagcgaa gagctcatgaccatccgcttcaccgccaagaccatcgagaagctgtgcgacatggtgcgc aaccaggtcgacgacgtgcgcaagaaagagcgcgagctacgccgcatcatcgtggacaag tgcggcttcccgcaggaagacttcattcgcgatttctcgggctacgacaagaacggcaag cgcgtgccgtcgcacctgctcgaccagaagtgggtcgaaaagcaagccgcctccggcaag ccctggagcgtggtgctggcgcgcaacatcccgccggtgcaggagctgcagcaaaagctg gccgacatccaggcccgcgtggtggtgccgctgacgcagttgaaagacatcaacaagcgc atgaacgaaggcgagtattcgtcccgcgccgccaagaaggaaatgatcgaggccaacctg cgcctcgtgatctccatcgccaagaagtacaccaaccgcggcctgcagttcctcgacctg atccaggaaggcaacatcggcctgatgaaggcggtcgacaagttcgaataccgtcgcggc tacaaattttcgacgtacgccacgtggtggatccgccaggccatcacccgctcgatcgcc gaccaggcacgcaccatccgcatcccggtgcacatgatcgagacgatcaacaagatgaac cgcatctcgcgccagcatctgcaggagttcggcttcgagcccgacgccggcatcctggcc gcgaagatggagattccggaagacaagatccgcaagatcatgaagatcgcgaaagagccg atctccatggaaacgccgatcggcgacgacgacgattcgcacctgggcgacttcatcgag gacagcagcaacacggcgccgatcgaggccgcgatgcaggccggcctgcgcgacgtggtg aaagacatcctcgattcgctcacgccacgcgaagccaaggtgctgcgcatgcgcttcggt atcgagatgagcaccgaccacacgctggaagaagtcggcaagcagttcgacgtgacgcgt gaacgcatccgccagatcgaagccaaggcgcttcgcaagctgaagcacccgtcgcgttcg gacaagctgcgctccttcatcgacacgctgtaa

DBGET integrated database retrieval system