Variovorax sp. PAMC 28711: AX767_17225
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Entry
AX767_17225 CDS
T04325
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
vaa
Variovorax sp. PAMC 28711
Pathway
vaa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AX767_17225
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vaa01007
]
AX767_17225
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vaa03016
]
AX767_17225
Enzymes [BR:
vaa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
AX767_17225
Amino acid related enzymes [BR:
vaa01007
]
Aminoacyl-tRNA synthetase
Class II (U)
AX767_17225
Transfer RNA biogenesis [BR:
vaa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AX767_17225
Prokaryotic type
AX767_17225
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
B5
FDX-ACB
Motif
Other DBs
NCBI-ProteinID:
AMM25903
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All DBs
Position
3565047..3567473
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AA seq
808 aa
AA seq
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MQFPESWLREFCNPPLSSAELAETLTMGGFEVEDSKPAAPPFSHIVVGEIVQAEQHPNAD
RLRVCQVDVGQGALLNIVCGAPNARVGIKVPTALVGAELPPGEDGRPFSIKLGKLRGVES
QGMLCSARELQLSEDHGGLLELAADAPVGADVREVLRLDDVLLTLKLTPNLAHGLSVFGI
ARELAALTGAPLRAPALAPVAPAVGDTLAVKVEAPELCGRFSGRIVRAVNTKAQTPAWMV
DRLARCGQRSVTALVDISNYVMFEYGQPTHIFDLDKIHGGLTVRWGRPGEQLKLLNGNTV
TVDAKVGVIADEREVESLAGIMGGDATAVSDDTQNIYVEAAFWWPEAIQGRSRRFNFSTD
AGHRFERGVDPSRTVEMIERITQLILEICGGQCGPIDDQILQLPDAKPVTLRVARAARVI
GMPLTQAQCADTLRRLGFAFQEGEGTLVVTPPPHRFDLTLEEDLIEEVARLIGYNNLPTT
APLAPITARVRTEAQRSRFAVRHRIAALGYQETINFSFVEVDWERDLAGNADPIKLLNPI
ASQMSVMRSSLIGSLLQVLKFNLDRKAPRARVFELGRVFLRDASVATTDTTVKGIHQPMR
VAGLAWGDAEASRWDGKPHRADFFDVKGDVEALLAPRVATFERVEHPALHPGRAARVVLD
GKAVGVVGELHPRWRQQWDFAHAPVVFELDLDAITVRPVPVAQAVPKHQPVERDIAVVVG
ESVSHDTLLDAVRAAPTQGLLRDATLFDIYRPQAGASAGGLAAGEKSMAVRLGFHADNAT
LTDEQVDPAVRAIVDQLANTLGARLRGG
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttcccgagtcctggttgcgcgagttctgcaacccgccgctcagcagcgccgaa
ctggccgagacgctcaccatgggcggattcgaagtcgaagacagcaaacccgccgcgccg
ccgttcagccacatcgtggtcggcgagatcgtgcaggccgagcaacatccgaatgccgat
cgccttcgcgtgtgccaggtcgatgtggggcagggtgcgttgctcaacatcgtgtgtggc
gcgcccaacgcgcgcgtcggcatcaaggtcccgaccgcactggtcggcgccgaactgccg
ccgggcgaggacggcaggccgttctcgatcaagctcggcaagctgcgcggcgtcgagagc
cagggcatgctgtgctcggcgcgcgagctgcaattgagcgaagaccacggcggcctgctc
gaactcgccgccgacgcgcccgtgggcgcggacgtgcgcgaggtgctccggctcgacgac
gtcctgctcacgctcaagctcacgccgaaccttgcgcacgggttgagcgtgttcggtatc
gcgcgcgaactggcggcgctcaccggcgcgccgctgagggcgcccgcgctcgcgcccgtt
gcccccgccgttggcgacacgctggccgtcaaggtcgaggcgcccgagctgtgtggccgc
ttctccgggcgcatcgtgcgtgccgtgaacacgaaggcgcagacgccggcctggatggtc
gaccgtctcgcgcgctgcggccagcgcagcgtgaccgcgcttgtcgatatctcgaactac
gtgatgttcgaatatggccagccgacgcacatcttcgacctcgacaagatccacggcggc
ctcaccgtgcgttggggccggccgggcgagcagctcaagctgctgaacggcaacaccgtc
acggtcgatgcgaaggtcggcgtgattgccgatgaacgcgaagtcgaatcgctggccggc
atcatgggcggcgacgcaactgccgtttcggacgacacgcagaacatttacgtcgaagcc
gccttctggtggcctgaagccattcagggtcgctcgcgccgcttcaacttctcgaccgac
gccgggcaccgcttcgagcgcggcgtcgacccgagtcgcacggtcgagatgatcgagcgc
atcacgcagctgatcctcgaaatttgcggcggccagtgcggtccgatcgacgaccagatc
ctgcagctgcctgatgcgaagccggtcaccttgcgcgtggcgcgcgcagcgcgtgtcatc
ggcatgccgctcacgcaagcccagtgcgccgacacgctgcgtcgcctcggcttcgcgttc
caggaaggcgagggcacgctcgtcgtgacaccgccgccgcaccgcttcgacctcacgctg
gaagaagacctcatcgaagaagtcgcgcggctcatcggctacaacaacttgccgacgacc
gcgccgctggcgccgatcaccgcgcgggtgcgcacggaggcgcagcgcagccgcttcgcg
gttcgccatcgcattgcggcgctggggtatcaggaaacgatcaacttcagctttgtcgaa
gtcgattgggagcgcgatctcgccggcaacgccgacccgatcaagttgctgaatccgatc
gccagccagatgagcgtgatgcgatcgtcgctgatcggctcgctgctgcaggtgctgaag
ttcaacctcgaccgcaaggcgccacgcgcgcgggtgttcgagctggggcgtgtgttcctg
cgcgacgcgagcgtcgcgaccacagacaccaccgtcaagggcatccaccagccgatgcgc
gtggccggcctggcctggggcgatgccgaggcgtcgcgttgggacgggaagccgcatcgc
gccgatttcttcgacgtgaagggcgatgtcgaagcgttgctggccccgcgcgtggcgacc
ttcgagcgcgtcgagcatccagcacttcatccgggccgcgccgcgcgcgtggtgctcgat
ggcaaggcggtcggcgtcgtcggcgagctgcatccgcgctggcgccagcagtgggacttc
gcgcacgcgcctgttgtgttcgagctcgatctcgacgccattaccgtgcgcccggtgcct
gtcgcgcaggcggtgccgaagcaccagccggtcgagcgcgacatcgcggtggttgtgggc
gagtctgtttcgcatgacacattgctcgacgccgtgcgtgcagcgccgacgcaagggttg
ttgcgcgatgcgacgctcttcgacatttaccgtccgcaggctggcgcctcggccggcggt
ctggccgcgggcgagaagagcatggccgtgcggttgggcttccatgcggacaacgccacc
ctgaccgacgagcaggtcgatccggcggtccgcgccatcgtcgaccagcttgccaacacc
ctcggggcccgcttgcgcggaggataa
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