Variovorax sp. PAMC 28711: AX767_17540
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Entry
AX767_17540 CDS
T04325
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
vaa
Variovorax sp. PAMC 28711
Pathway
vaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AX767_17540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaa03400
]
AX767_17540
Enzymes [BR:
vaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
AX767_17540
DNA repair and recombination proteins [BR:
vaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AX767_17540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adenine_glyco
DUF2336
HhH-GPD
DUF1409
Motif
Other DBs
NCBI-ProteinID:
AMM26854
LinkDB
All DBs
Position
complement(3631958..3632515)
Genome browser
AA seq
185 aa
AA seq
DB search
MVTPARCAWAESDPLLASYHDTEWGVPEHDSRALWEKLMLDGFQAGLSWLIILRKRDAFR
AAFQNFDPEKVARFGEEDVERLVQDAGIVRSRSKIQAVIGNARAYLAMQAAGEDLSAFVW
TMAGGTPVRNASAERLVKSPLSEEMSAALKKRGFKFVGPVIVYAWLQAVGVIDDHDHHCF
RHVPH
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgcccgcgcgctgcgcctgggccgagagcgatccgctgctcgccagctaccac
gacaccgaatggggcgtgccggagcacgacagccgcgctctgtgggaaaagctcatgctc
gacggcttccaggccggcttgtcgtggctcatcatcctgcgcaagcgcgatgcgtttcgc
gcggcgtttcaaaatttcgatcccgaaaaagtcgcgcgcttcggcgaagaagatgtcgag
cggctggtgcaggacgccggcatcgtgcgctcccgctcgaagatccaggcggtcatcggc
aacgcccgcgcctatctggcgatgcaggccgccggcgaggatttgtcggcgttcgtctgg
acgatggcgggcggcacgccggtgcgcaacgcgagcgccgagcgcctggtgaaaagcccg
ctgtccgaagagatgtcggcagcgctcaagaagcgcggtttcaagttcgtcgggccggtg
atcgtgtatgcgtggttgcaggcggtcggcgtgatcgacgaccacgatcaccactgcttt
cggcacgtcccgcactga
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