Variovorax sp. PAMC 28711: AX767_17870
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Entry
AX767_17870 CDS
T04325
Name
(GenBank) hypothetical protein
Organism
vaa
Variovorax sp. PAMC 28711
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
Motif
Other DBs
NCBI-ProteinID:
AMM26011
UniProt:
A0A126ZHU5
LinkDB
All DBs
Position
complement(3706372..3709653)
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AA seq
1093 aa
AA seq
DB search
MSAHANAQTTLTFGGGSGSKAAITEGQGGLAGLAGGGGGGGGGYKDDPNSGIGGSGGAGA
RESAPAQAGVNGGDSRITSGLGAPAGAPGSSDLSAGGGGGGGGALGVANGTAGGDGGAGS
ESGATSTTLGAAVNGTAGGESRPVLGYAGGGGGGGGALVLTAVGAVIDTNGQTVTGGAGG
GSPIDGGGGGGAGLVLVNGGSIANATGRIVAGAGGDGYAGGEGGTGVFLYKGGTLANGAN
GVLRGGAGGAGGTFASLPDIGRGGQGGDAVRSNGGQITNAGLAQGGDGGAATVGGNGGNG
IVVSGTATVTSSTTGRVIGGAGGAGGIVVGLETVSAAGRGGSGVVLLDTGATLVNSGTVT
GGNAGARGVGTSAAGGVGVTGSANGGTTVVNAGRIAGGLDSNAARANAVQFQGGGNTLEL
RSGAVFDGKVVVAPGNTGNTLALGGDATTDSFNVATIGADYQGFDRFNKRGTSVWTLSGR
QSAVTPWTVDGGVLALTDNANLGDAAGKLTLNDGTLRLSADNLRIANAVQLGSGQPTVDT
GAFNGTLAGAIDGSGSLTKIGAGALVLTAANTYTGATNVGQGTLRAGAVNTLSAASAHTV
ATGATLDLGGFNQTVASLTNAGTVSLLSGAPGTTLTVNGAYVGNGGVLRLGTALGGNGSA
TDRLLLNGGSASGNTTIQITNLGGLGAQTTGNGIEVVAARNGATSTPTAFALANGHVDAG
AFAYTLHGADQSWFLRSDTGAVTPTTPVTPGTPAIPGVPGSTPGGAFPQITTPTYRTEVP
LFAALPQQLRQADLAMLGNLHQRIGDEPVAGAGTPAANGSRNAWGRVISTDIDVRQQGTV
SPASKGRVDGFQVGTDLYADAHWHAGVYVGQLDGDVQTSGFANGVRGNVGSNDLRARYLG
AYATWMNGNGFYADAVLQGGDHRYTLRPQGNAQVTGKGDSLLASIEVGQAFALGQGWTIE
PQLQLMHQRVDLDDVFISGARVQQNPDNGWIARAGVRVKGEMSTSLGALQPYGRVNLYRA
SSGTDISRFVGPAGTTDIATRTGGSWGEVAAGATLALNPTWGVYGEIGRLFAMGGDARVK
SGLQGSLGLKARW
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
ttgtcggcccacgccaacgcacaaacgacccttaccttcggcggcggttcgggcagcaag
gcggccatcactgaagggcaaggcggcctcgccggactcgccggcggtggtggcggcggt
ggcggtggctataaggatgaccccaattccggcatcggcggcagcggcggtgctggcgcg
cgggaaagcgcgccagcacaagccggcgtgaatggcggtgacagccgcatcaccagcggc
ctgggcgcgccggcgggcgcaccgggcagctccgacctcagcgcaggcggcggcggtggc
ggcggtggcgcgcttggcgtggcgaacgggaccgctggcggcgatggcggtgcaggcagc
gaaagcggggcgacatcgaccacgctgggcgctgccgtcaacggcacggccggtggcgaa
tcccgtcccgtgctcggctacgcgggcggcggcggcggcggcggtggcgcgttggtcctg
acagcggtcggcgccgtgatcgacaccaacggtcagaccgtgacgggcggcgccggcggc
ggatcgccgatcgatggcggcggcgggggcggtgccgggctggtgctggtgaacggcggc
agcatcgccaacgccaccggtcgcatcgtggccggtgcgggcggcgacggctatgcgggc
ggcgaaggaggcactggcgtctttctttacaagggcggcacgctcgcgaacggcgccaat
ggtgtgttgaggggcggcgcaggcggcgccggtggaacctttgcctccctccctgacatc
ggccgaggcggtcagggcggcgacgcggtgcgcagcaacggcggccagattaccaatgcc
ggattggcgcaaggcggtgacggtggcgccgccacggtgggcggcaacggcggcaacggc
atcgtggtgagcggcacggccacggtgaccagcagcacgaccggtcgggtgattggcggc
gctggcggcgctggcggcatcgtcgtcggccttgaaaccgtctcagcggcgggccgtggc
ggcagcggggtcgtcctgctggacaccggcgccacgctggtcaacagcggcacggtgacc
ggcggcaacgccggcgcacggggtgtcggcacctccgcagcgggcggcgtgggcgtcaca
ggttcggccaacggcggcaccacggtggtcaacgccggccgcatcgcgggcggcctcgac
agcaacgcggcgcgcgccaatgccgtgcagttccagggcggtggcaacacgctcgaactg
cgctcgggcgctgtgttcgacggcaaggtcgtcgtggcgccgggcaacaccggcaacacg
ctggcactcggcggcgacgcgaccacggacagcttcaacgtcgcgaccatcggcgcggac
taccagggcttcgatcgcttcaacaagcgcggaaccagcgtgtggacgctgtccggcagg
caatcggccgtcacgccctggacggtcgacggcggcgtgctcgcgctgaccgacaacgcc
aacctgggcgacgccgccggcaagctcacgctgaacgacggcacgctgcggctgtcggcc
gacaacctgcggatcgcgaacgcggttcagctcggaagcggccagcccacggtcgacacc
ggcgccttcaacggcacgctcgccggtgccatcgacggcagcggctcgctcaccaagatc
ggcgccggcgcgctcgtgctgaccgccgccaacacctacaccggcgccaccaatgtcggc
cagggcacgctgcgtgccggggcggtcaacacgctgagcgccgcatcggcgcacacggtc
gcgaccggcgccacgctcgacctcggcggcttcaaccagaccgtcgcctcgctgaccaac
gcgggcaccgtgtcgctgctgagcggcgcaccgggcaccacattgaccgtgaacggcgcc
tacgtcggtaacggcggcgtgctgcgtctgggcacggcgctgggcggcaacggcagcgcg
accgaccgcctgctgctcaacggcggcagcgccagcggcaacaccacgatccagatcacc
aacctcggcggcctgggtgcgcagaccacgggcaacggcatcgaagtggtggcggcgcgc
aacggcgccacctcgacgccaaccgccttcgcgctggccaacggccacgtcgacgccggc
gctttcgcgtacacgctgcacggcgccgaccagagctggttcctgcgctcggacaccggc
gcggtcacgcccaccacgcctgtgactcccggcacgcccgctattccgggcgtgcccggc
tcgacccctggcggcgccttcccgcagatcaccacgccgacgtaccgcacggaagttccg
ctgttcgccgcgttgccacagcagcttcgccaggccgacctcgcgatgctcggcaacctg
caccagcgcatcggcgatgagcccgtggccggcgccggcaccccggccgccaatggttcg
cgcaatgcgtggggccgcgtgatttccaccgacatcgacgtgcgccagcaaggcaccgtg
tcgcccgcgagcaagggccgtgtcgacggcttccaggtcggcaccgacctgtacgccgac
gcccactggcacgccggcgtctacgtcggccagctcgacggcgacgtgcagaccagcggc
ttcgccaatggcgtgcgcggcaacgtgggcagcaacgacctgcgcgcgcgctatctcggc
gcgtacgccacctggatgaacggcaacggcttctatgccgacgccgtgctgcagggcggc
gatcaccgctacacgctgcgcccgcaaggcaacgcccaggtcaccggcaagggcgacagc
ctgctggcgtcgatcgaggtcggccaggcgttcgcgctgggccagggctggacgatcgag
ccgcaactgcagctgatgcaccagcgcgtcgacctcgacgacgtgttcatctcgggcgcc
cgcgtccagcagaaccccgacaacggctggatcgcgcgtgcaggcgtgcgtgtgaagggc
gagatgagcacctcgctcggcgcgctgcagccgtacggccgcgtcaacctgtaccgcgct
tccagcggcaccgacatctcgcgcttcgtcggcccggccggcaccaccgacatcgcaacg
cgcaccggtggcagctggggcgaagtggccgccggcgcgacgctggccctcaacccgacg
tggggcgtctacggcgaaatcggccggctcttcgcgatgggcggcgacgcgcgggtcaag
agcggcctgcaaggctcgctgggcctcaaggcccgctggtaa
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