Variovorax sp. PAMC 28711: AX767_18285
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Entry
AX767_18285 CDS
T04325
Name
(GenBank) TetR family transcriptional regulator
KO
K23777
TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
Organism
vaa
Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vaa03000
]
AX767_18285
Transcription factors [BR:
vaa03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
AX767_18285
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GFIT
Motif
Pfam:
CecR_C
TetR_N
TetR_C_30
Motif
Other DBs
NCBI-ProteinID:
AMM26085
UniProt:
A0A126ZI28
LinkDB
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Position
complement(3796266..3796961)
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AA seq
231 aa
AA seq
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MSTSILPDATVRVSRSDGIEARSRLLYAALALFAAKGYAKTSTREIAKAAGANIAAISYY
FGDKAGLYAATFTEPFGGDPQELIAQFTAPGLPLEAALRIFMVGYLDGLKQGDIARQCMR
LHMRELIDPTSEWKHAMEKDIQAPHEALASVLCRHLEVKRFDDDIHRLTFSVTGLAIQLF
VMQDIVDALQPQLLGSTAQIDAWADRLVAYGLALVAAEAARRRKSSRKQEK
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgagcacttccatcctccccgacgcgacagtgcgcgtctcgcgcagcgacggcatcgaa
gcccgctcgcgccttctctacgccgcgctcgccctcttcgccgccaagggctacgccaaa
acctccacgcgggagatcgccaaggcggcgggggccaacatcgcggcgatcagctattac
ttcggcgacaaggccgggctctatgcagcgaccttcaccgagcctttcggcggcgatccg
caggaactgatcgcgcagttcacggcgcccggcctcccgctcgaggcggcgctgcgcatc
ttcatggtgggctacctcgacgggctgaagcaaggcgacatcgcgcggcaatgcatgcgg
ctgcacatgcgcgaactgatcgacccgaccagcgagtggaagcacgcgatggagaaggac
atccaggcgccgcacgaggcactggccagcgtgctgtgtcggcacctcgaagtgaagcga
ttcgacgacgacatccatcgcctcaccttctcggtcaccgggctcgcgatccagctcttc
gtgatgcaggacatcgtggacgcgctgcagccccaactgctcggctcgaccgcgcaaatc
gatgcatgggccgaccggcttgtcgcgtacggtctcgcgctggtcgctgccgaagcggcc
cgccgccgcaagtcatcaaggaagcaagagaaatga
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