Variovorax sp. PAMC 28711: AX767_19190
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Entry
AX767_19190 CDS
T04325
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
vaa
Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaa03400
]
AX767_19190
DNA repair and recombination proteins [BR:
vaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
AX767_19190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
AAA_22
AAA_10
TrwB_AAD_bind
T2SSE
ResIII
AAA_19
AAA_7
SLFN-g3_helicase
AAA_16
AAA_30
nSTAND_NTPase5
AAA_6
AAA_28
nSTAND3
Zot
Motif
Other DBs
NCBI-ProteinID:
AMM26239
LinkDB
All DBs
Position
complement(3981065..3982585)
Genome browser
AA seq
506 aa
AA seq
DB search
MADPLLIARHDTVECALLPALANRHGLITGATGTGKTVTLQTMAEKLSSIGVPVFMADVK
GDLTGISQPGHIGDKMAATLEERGIEAPTPMACPVTLWDVFGEQGHPVRATVSDMGPLLL
GRMLDLNETQAGVLNIVFKIADDNGLLLLDLKDLRAMLQHVGENASQFTTEYGNISAASV
GAIQRGLLQIETQGGDKFFGEPMLNIADFMQTVGGKGVVNILTADKLMNSPRLYATFLLW
MLSELFEQLPEIGDPDQPKLAFFFDEAHLLFNEAPKALVERIELVVRLVRSKGVGVYFVT
QNPLDIPDSVLAQLGNRVQHALRAFTPRDQKAVKATATTMRPKPGLDIEAAITELAVGEA
LVSLLDSKGRPSVTERVFVLPPASQLGPITPAQRQALLANSLVAGVYEKTVDRESAYEKL
KGRAATAPDAPPAIAGKPGAAAPADAGGGLMGGLNDLLFGSTGPRGGKRDGLAQTMARSA
VRTMGTSVGKEILRGVLGGIFGAKKR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccgcttctgattgcccgccacgacaccgtcgagtgcgccctcctccccgcg
ctggccaaccgccacggcctcatcaccggggccaccggcaccggcaagaccgtgacgttg
cagaccatggccgagaagctttcgagcatcggcgtgccggtgttcatggccgacgtgaag
ggcgacctcaccggcatcagccagcccggccacatcggcgacaagatggccgccacgctc
gaggaacgcggcatcgaggcgccgacgccgatggcctgcccggtcacgctgtgggacgtg
ttcggcgaacagggccatccggtgcgcgcgaccgtttccgacatgggcccgctgctactc
ggccgcatgctcgacctgaacgaaacgcaggccggcgtgctgaacatcgtgttcaagatc
gccgacgacaacggcctcctgctgctcgacctcaaagacctgcgcgcgatgctgcagcac
gtcggcgagaacgccagccagttcaccaccgaatacggcaacatcagcgccgccagcgtg
ggcgcgatccagcgcgggctgctgcagatcgaaacgcagggcggcgacaagttcttcggc
gagccgatgctcaacatcgccgacttcatgcagaccgtgggcggcaagggcgtggtcaac
atcctgaccgccgacaagctgatgaattcgccgcggctctacgcgaccttcctgctgtgg
atgctgtcggagttgttcgagcagctccccgaaatcggcgaccccgaccagccgaagctg
gcgttcttcttcgacgaggcgcacctgctgttcaacgaagcgcccaaggcgctggtcgaa
cgcatcgaactcgtggtgcggctcgtgcgctcgaagggcgtcggcgtttatttcgtgacg
cagaacccgctcgacattcccgattcggtgctggcccagctcggcaaccgcgtgcagcac
gcgctgcgcgccttcacgccgcgcgaccagaaagccgtcaaggcgaccgcgaccacgatg
cgtccgaagccgggtctggacatcgaagccgccatcaccgaactcgcggtcggcgaggcg
ctggtgagcctgctcgattcgaaaggccggcccagcgtgaccgaacgcgtcttcgtgctg
ccgcccgccagccagctcggcccgatcacgcccgcccagcggcaggcgctgctcgccaat
tcgctggtggccggcgtctacgaaaagacggtcgatcgcgaatccgcttatgaaaaactg
aaaggccgcgccgccaccgcgcccgatgcgccacctgctatcgccggcaagcctggcgcc
gcagcgcccgccgatgccggtggtgggctgatgggcggactgaacgatctgctgttcggc
agcaccggcccgcgcggcggcaagcgcgacggcctggcgcagaccatggcgcgctctgcc
gtgcgcacgatgggcacgagcgtcggcaaggaaatcttgcgcggggtgctgggcgggatc
ttcggcgcgaagaagcgctag
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