Variovorax sp. PAMC 28711: AX767_19310
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Entry
AX767_19310 CDS
T04325
Name
(GenBank) ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
vaa
Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vaa03019
]
AX767_19310
03009 Ribosome biogenesis [BR:
vaa03009
]
AX767_19310
Messenger RNA biogenesis [BR:
vaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AX767_19310
Ribosome biogenesis [BR:
vaa03009
]
Prokaryotic type
rRNA processing factors
AX767_19310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
AMM26260
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All DBs
Position
4002364..4003890
Genome browser
AA seq
508 aa
AA seq
DB search
MQDILINWSPQETRVALVEHGAVQELHVERTLERGLVGNVYLGKVSRVLPGMQSAFIDIG
LERTAFLHVADIVAPFTPGSRASTQAPERDHRHQGAIVPIEKQVFEGQSLLVQVIKDPIG
TKGARLSTQISIAGRLLVFLPQDNHIGVSQKIPPAQRDALRARMQALIEAAAAADSGGAV
PANTGGFILRTNGEDSSDAELAEDIAYLRKTWSRIRDSSSKLPAISLLHQDLSLLQRVLR
DMTVEDTQTIRIDSREQFDVLLKFGLEFMPQAAGKLQHYKGERPIFDLYSVDEEIAKALG
RRVELKSGGYLVVDQTEALTTVDVNTGGFVGARNFDDTIFKTNLEAAQAIARQLRLRNLG
GIVIVDFIDMVRDDHREQVLGEFRKQLARDRVKTTAGGFSQLGLVEMTRKRTRESLAHML
CEPCLACSGQGIVKTARSVAYDVMREILREARQFTPREFRIVSSPQVIELFLDEESQHLA
GLSDFIGKPISLQSEPAIGQGQYDIVLL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacatcctgatcaactggtccccgcaagagacccgcgtcgcactggtggagcat
ggcgcggtccaggaactgcacgtcgaacggacgctggaacgaggtctggtcggcaatgtc
tacctcggcaaagtgtctcgtgtgctccccggcatgcagtccgcgttcatcgacatcggc
ctggagcgcaccgcgttcctgcatgtcgccgacatcgtggcgcctttcacgccgggctcg
cgtgcgagcacgcaggcgcccgagcgcgaccatcgccatcagggcgcgatcgtgcccatc
gaaaagcaggtgttcgaaggccagtcactgctggtgcaggtgatcaaggacccgatcggc
accaagggcgcgcggctgtccacacagatcagcatcgccgggcgcctgctggttttcttg
ccgcaagacaaccacatcggggtgtcgcaaaagattccgccggcgcagcgcgatgcattg
cgcgcgcgcatgcaggccctgatcgaagccgctgccgccgcggacagcggcggcgcggtg
ccggcgaacaccggcggcttcatcctccgcaccaacggcgaggattcgagcgacgccgaa
ctcgcggaagacatcgcctacctgcgcaagacctggtcgcgcattcgcgattcgtcgtcg
aagctgccggcgatatcgctgctgcaccaggacctgagcctgctgcagcgcgtgctgcgc
gacatgaccgtcgaagacacgcagaccattcgcatcgactcgcgcgaacagttcgacgtg
ctgctcaagttcgggctcgagttcatgccgcaggcggctggcaagctgcagcactacaag
ggcgagcggccgattttcgacctgtactcggtcgacgaagagattgccaaggcgctgggc
cgccgcgtcgagctcaagtcgggcggctacctcgtggtcgaccagaccgaggcgcttacc
actgtcgacgtgaacaccggcggcttcgtcggcgcgcgcaatttcgacgacacgattttc
aagaccaacctcgaagcagcccaggccatcgcgcgccaattgcggctgcgcaacctgggc
ggcatcgtgatcgtcgacttcatcgacatggtgcgcgacgaccaccgcgagcaggtgctg
ggcgagttccgtaaacagctggcgcgcgatcgggtcaagaccacggccggtggcttttcc
cagttgggcctggtcgaaatgacgcgcaagcgcacgcgcgaatcgttggcccacatgctg
tgcgaaccgtgtctggcctgcagcggccagggcatcgtcaagacggcgcgcagcgtcgcc
tacgacgtgatgcgcgaaatcctgcgcgaggcacggcagttcacgccgcgcgagttccgc
atcgtctcgtcgccccaggtgatcgagctgttcctcgacgaagaaagccagcatctggca
gggctgagcgacttcatcggcaaaccgatctcgctgcagtcggagcccgccatcgggcag
ggccagtacgacatcgtgctgctctga
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