Variovorax sp. PAMC 28711: AX767_19465
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Entry
AX767_19465 CDS
T04325
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
vaa
Variovorax sp. PAMC 28711
Pathway
vaa00330
Arginine and proline metabolism
vaa01100
Metabolic pathways
vaa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
AX767_19465
Enzymes [BR:
vaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
AX767_19465
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DegT_DnrJ_EryC1
Beta_elim_lyase
WHH
Motif
Other DBs
NCBI-ProteinID:
AMM26288
UniProt:
A0A126ZGM7
LinkDB
All DBs
Position
4035785..4038076
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AA seq
763 aa
AA seq
DB search
MKFRFPIVIIDEDFRAENTSGLGIRALAQAIESEGFEVLGVTSYGDLSQFAQQQSRASAF
ILSIDDEEFTPGPDLDPAVLNLRSFIEQVRRKNAEVPIYIYGETRTSRHIPNDILRELHG
FIHMFEDTPEFVARHIIREAKSYLEGVQPPFFKALIDYAEDGSYSWHCPGHSGGVAFLKS
PVGQMFHQFFGENMLRADVCNAVEELGQLLDHTGPVAASERNAARIFNADHCFFVTNGTS
TSNKMVWHHTVAPDDVVVVDRNCHKSILHAIIMTGAIPVFMKPTRNHFGIIGPIPQSEFE
QSAIKAKIKANPLLAHVDPDTVKPRVMTLTQSTYDGVIYNTETIKNMLDGYVDTLHFDEA
WLPHAAFHPFYGAYHAMGKRRVRPKEALVFATQSTHKLLAGISQASHVLVQDSQNRALDR
DLFNEAYLMHSSTSPQYAIIASCDVAAAMMEPPGGTALVEESILEALDFRRAMRKVEEEF
GKDEWWFKVWGPEKLVDEGIGRAEDWIMKGEKEGKRKTKKSPRNWHGFGDLADGFNMLDP
IKSTIVTPGLDLEGNFAETGIPASVVTKFLAEHGVIVEKTGLYSFFIMFTIGITKGRWNT
LLTALQQFKDDYARNQPMWRILPEFCQVHPGYEKLGLRDLCQHIHKLYARFDVARLTTEM
YLSDLTPAMKPSDAFAHIAHRKTERVDIDELEGRITTSLITPYPPGIPLLIPGEVFNKKI
VDYLKFAREFNKECPGFETDIHGLVAKIDETGKKRYYADCVRR
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcgctttccgatcgtcatcatcgacgaggacttccgcgccgagaacacctcg
gggctgggcattcgcgcattggcgcaagccatcgagagcgaaggcttcgaggtgctcggc
gtcacgagctatggcgacctgagccagttcgcgcagcagcaaagccgggccagtgccttc
atcctgtcgatcgacgacgaggaattcacgcccgggcccgacctcgatccggccgtgctc
aacctgcgcagcttcatcgagcaggtgcgccgcaagaacgccgaggtgccgatctacatc
tacggcgagacgcgcacctcgcgccacatcccgaacgacatcctgcgcgaactgcatggc
ttcatccacatgttcgaggacacgccggagttcgtggcgcgccacatcatccgcgaggcc
aagagctacctcgagggcgttcagccgccgttcttcaaggcgctgatcgactacgcggaa
gatggctcgtactcgtggcactgcccgggtcactcgggtggcgtggcctttctcaagagc
ccggtgggccagatgttccaccagttcttcggcgagaacatgctgcgcgccgacgtgtgc
aatgcggtggaagaactcggtcaactgctcgaccacaccggtccggtggcggccagcgag
cgcaatgccgcacgcatcttcaacgccgaccactgcttcttcgtgaccaacggcaccagc
accagcaacaagatggtgtggcaccacacggtggcgcccgacgacgtggtggtggtcgac
cgcaactgccacaaatcgatcctgcacgcgatcatcatgaccggcgcgattcccgtcttc
atgaagcccacgcgcaaccatttcggcatcatcggcccgatcccgcagagcgagttcgag
cagagcgcgatcaaggccaagatcaaggccaacccgttgctcgcgcatgtcgaccccgac
accgtcaagccgcgcgtgatgacgctcacccagtcgacctacgacggcgtgatctacaac
accgagaccatcaagaacatgctcgacggctacgtcgacacgctgcatttcgacgaagcc
tggttgccgcacgcggcgttccacccgttctacggcgcctaccacgcgatgggcaagcgc
cgggtgcgaccgaaggaggcgttggtgttcgccacgcaatcgacccacaagctgctggcc
ggcatcagccaggccagccacgtgctggtgcaggactcgcagaaccgtgcgctcgaccgc
gacctgttcaacgaggcctacctgatgcactcgtcgaccagcccgcagtacgcgatcatc
gcgagctgcgacgtggctgccgccatgatggaaccgcccggcggcaccgcattggtggaa
gagtccatcctcgaagcgctcgacttccgccgcgccatgcgcaaggtcgaggaagagttc
ggcaaggacgagtggtggttcaaggtctggggccccgagaagctggtcgacgaaggcatc
ggtcgcgccgaagactggatcatgaagggcgagaaggagggcaagcgcaagacgaagaag
tcgccgcgcaactggcacggcttcggtgacctggccgacggcttcaacatgctggacccg
atcaagtcgacgatcgtgacgccgggcctcgacctggaaggcaactttgcagaaaccggc
attccggccagcgtggtgaccaagttcctcgccgagcacggcgtgatcgtggagaagacc
gggctctacagcttcttcatcatgttcaccatcggcatcaccaagggccgctggaacacg
ctgctcacggcgctgcagcagttcaaggacgactacgcccgtaaccagccgatgtggcgc
atcctgccggagttctgccaggtgcatcccggctacgagaagctcggcctgcgcgacctg
tgccagcacatccacaagctgtatgcgcgcttcgacgtggcgcgcctcaccaccgagatg
tacctgagcgacctcacgccggcgatgaagccgagcgatgccttcgcgcacatcgcgcac
cgcaagaccgagcgcgtggacatcgatgaactggaagggcgcatcacgaccagcctgatc
acgccgtacccgccgggcattccgctgctgattccgggcgaggtcttcaacaagaagatc
gttgactacctgaagttcgcgcgcgagttcaacaaggaatgcccgggcttcgagaccgac
atccacggtctggtggcgaagatcgacgagacgggcaagaagcgctactacgccgactgc
gtgcgtcgctga
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