KEGG   Variovorax sp. PAMC 28711: AX767_20040
Entry
AX767_20040       CDS       T04325                                 
Name
(GenBank) dicarboxylate--CoA ligase PimA
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
vaa  Variovorax sp. PAMC 28711
Pathway
vaa00061  Fatty acid biosynthesis
vaa00071  Fatty acid degradation
vaa01100  Metabolic pathways
vaa01212  Fatty acid metabolism
vaa02024  Quorum sensing
vaa04146  Peroxisome
Module
vaa_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:vaa00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    AX767_20040
   00071 Fatty acid degradation
    AX767_20040
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    AX767_20040
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AX767_20040
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:vaa01004]
    AX767_20040
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vaa04147]
    AX767_20040
Enzymes [BR:vaa01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     AX767_20040
Lipid biosynthesis proteins [BR:vaa01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   AX767_20040
Exosome [BR:vaa04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   AX767_20040
  Exosomal proteins of breast cancer cells
   AX767_20040
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: AMM26911
UniProt: A0A126ZKA4
LinkDB
Position
4153178..4154833
AA seq 551 aa
MSTRPWIKTYPAGTSWHAPLRQMPLTQLLGNAVARWPANIALNYEGRDFSYGELATLSDR
MAQGLQRLGVRPGMHVGLYLPNTPHYFISFFAVLKAGATVVNYSPLDAGAVLKHKIEDSH
TDLIITLDAPGLFSKMDGFLGNTRLKTLVVGSAGEFNAGAQPVSTVAWDAQRVRFADLLV
AGDAAFVPHTVTELGDVAVLQYTGGTTGHPKGAMLTHANLSSAVSQVWHTMVGAGTLTEG
EERFLAVLPLFHIYSLVVNMLFGLSIGAEVILQQRFELQAALDEIVKRKVSVFLGVPTMF
VAFTGHPDIARTDLSSLKFCNSGGAPIAAEVYANFVRMAQCRLQEGWGMTETCTMATSSP
GVGAHVAGSCGIPVPGVEVKVIDLVDHATEVPLGERGELCIRGPNVMKGYWNKPEATAES
MTAGGYLRTGDVGYMTDAGFVYIVDRTKDMMICGGFNVYPRNIEEAIYRHPAVEEVIVIG
VPDAYRGQSPKAFIKYRDGATPLSLEELRTFLVEYLGKHEMLHALETRSELPKTAVGKLS
KKDLYAEEAGR
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgtcaacacgcccctggatcaagacttatcctgccggcacgagctggcacgcgccgctc
aggcaaatgccgctgacgcaactgctgggcaacgccgtcgcgcggtggcctgcgaacatc
gcgctgaactacgaagggcgcgacttcagctacggtgaactggccacgctgtcggaccgc
atggcgcaagggctgcaacgcctcggcgtgcggcccggcatgcacgtcgggctctacctg
cccaacacgccgcactacttcatcagcttcttcgcggtgttgaaggcgggtgcgacggtc
gtcaattactcgccgctcgatgcgggcgcggtgctcaagcacaagatcgaggacagccac
accgacctcatcatcacgctcgacgcaccgggcctcttctcgaagatggacgggtttctc
ggcaacacgcgcctgaagacgctggtggtcggctctgccggcgaattcaatgctggcgcg
cagccggtcagcaccgtcgcatgggacgcgcagcgcgttcgcttcgccgacctcctggtg
gcgggcgacgctgccttcgtaccgcacaccgtgaccgagctcggcgacgtcgcggtgctg
cagtacaccggcggcaccaccgggcatcccaagggcgcgatgctcacgcacgccaacctg
agttcggccgtttcgcaggtctggcacacgatggtcggcgccggcacgctgaccgaaggc
gaagagcgctttctggccgtgctgccgctgttccacatctattcgctggtggtgaacatg
ctgttcggcctctcgatcggcgccgaggtgatcctgcagcagcgcttcgagctgcaggcc
gcgctggacgagatcgtgaagcgcaaggtcagcgtgttcctcggcgtgccgacgatgttc
gtcgccttcaccggccatcccgacatcgcgcgcaccgacctgtcgtcgctcaagttctgc
aactcgggcggcgcgccgatcgcggcggaggtctacgcgaacttcgtgcgcatggcgcag
tgccggctgcaggaaggctggggcatgacggaaacctgcaccatggcgacatcctcgccc
ggcgtcggggcgcatgtcgcgggctcctgtggcatcccggtgcccggcgtcgaggtgaag
gtgatcgacctggtcgaccacgccaccgaggtaccgctcggcgaacgcggcgaactctgc
atccgcgggccgaacgtcatgaagggctactggaacaagcccgaagcgacggccgaatcg
atgaccgccggcgggtacctgcgcaccggcgatgtcggctacatgaccgatgccggcttc
gtctacatcgtggaccggaccaaggacatgatgatttgcggcggcttcaacgtgtacccg
cgcaacatcgaagaggcgatctaccgccatccggcggtcgaggaagtcatcgtgatcggc
gtgcccgacgcctaccgcggccagtcgccgaaagccttcatcaaataccgcgatggcgcc
acgccgctctcgctcgaggaactgcgcacgttcctggtcgagtatctcggcaagcacgag
atgctccatgcgctggagacgcgctccgagctgccgaagacggccgtcggcaagttgtcg
aagaaggacctctacgccgaagaagcgggccgctga

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