Variovorax sp. PAMC 28711: AX767_20235
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Entry
AX767_20235 CDS
T04325
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
vaa
Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vaa03036
]
AX767_20235
Chromosome and associated proteins [BR:
vaa03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
AX767_20235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
ABC_tran
CCDC39
AAA_29
Lge1
DUF1664
PUMA_CC
Motif
Other DBs
NCBI-ProteinID:
AMM26418
LinkDB
All DBs
Position
complement(4199387..4202902)
Genome browser
AA seq
1171 aa
AA seq
DB search
MRLNSIKLSGFKSFAEPTNFLLPGQLVGVVGPNGCGKSNIMDAVRWVLGESRASELRGES
MQDVIFNGTTTRKQASRSSVELVFDNADHRAGGQWAQFTEIAVKRVLTRDGTSSYYINNQ
PVRRRDVQDVFLGTGLGPRAYAIIGQGTISRIIESKPEELRLFLEEAAGVSKYKERRRET
ESRLGDTRENLTRVEDILRELNANLERLEKQAEVAARYNTLQGDATKKQHQLWFLKRGES
ENDQAKVKADAGKALNDLESRTADLRRIESELETVRQAHYAAGDHVNQAQGKLYEASAEV
GRLEGEIRFVVEGRQRVEQRLVQLREQIAQWGTRREDAEAEIETLAGQGVTAEEQAITLA
AQLEDHDARMPELEEAQQRAQTEANAQRATVTQVQQQIQVLAADQRNIEDQNRQLTQRSE
RLRADKNALAAPDEARLLELQSQLDVAQESSAEAEARLQELQDNVPQLDDDRRTRQQAVN
TEGARHAELSARLEALRALQEKVKTDGKLAPWLAKHGLEGLQGLWSRIHIEQGWESALES
ALRERMGALEVSRLEMVRAFGNDAPPAKLAFYSPPAAGVSTGQGALPRLSDLLRLNDAGL
QALLVEWLHGCLTAQSFDDAMAQRDQLQPGEVIYVKSGHAVSLHSVSFYAQDSEQAGLLA
RQQEMENLDRQLRAQTLINDESRTALVRAEAAYADAASRLVGARREAAETQSRAHELQVE
TLRLSQLAEQTRARSEQLANDLGEVDAQLEELQEKRFAAESRFEELDMQLADSQERHAQL
DERVIEAGRALNAAREQHRSLERQAQEATFSQRTLEARRGELNRAIETAAQQNVALADEE
ERARAEFGRLSDAAAQAGLQDALSLKLERETALGATRSQYDDLTQKLRASDERRLTLERE
LDPLRQRITEFQLKEQAARLGFEQYQQLLTDAEADLEAVALSIDTDKVKLTGLQGEIDRL
HREVAALGAVNLAALDELATATERKTFLDAQSADLNEAIGTLEDAIRKIDGETRELLGGT
FKVVNEHFSRMFPELFGGGNARLVMTGDEILDAGVQVLAQPPGKKNQTIHLLSGGEKALT
AIALVFAIFQLNPAPFCLLDEVDAPLDDANTERYAKLVTAMSRETQFLFISHNKIAMEMA
EQLIGVTMQEQGVSRIVAVDMESAVSLVEAA
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctcaactccatcaagctttccggcttcaaatcgttcgctgagcccaccaatttt
ttgctgcccggccaactcgtcggcgtggtcggcccgaacggttgcggcaagtcgaacatc
atggatgcggtgcgttgggtgctcggtgaatcgcgcgccagcgaactgcgcggcgagtcg
atgcaggacgtgatcttcaatggcaccacgacgcgcaagcaggccagccgatcgagcgtc
gaactggtgttcgacaacgccgaccaccgtgcgggcggacagtgggcgcagttcaccgaa
atcgccgtcaagcgcgtgctgacgcgcgacggcaccagcagctactacatcaacaaccag
ccggtgcgtcggcgcgacgtgcaggacgtgttcctcggaaccggcctcggcccgcgtgcc
tacgcgatcatcgggcagggcacgatcagccggatcatcgagtccaagcccgaagagctg
cgcctgttcctcgaagaagcggccggcgtgtcgaagtacaaggagcgtcgccgcgagacc
gaaagccggctcggcgacacgcgcgagaacctcacgcgcgtcgaagacatcctgcgcgaa
ctcaacgccaatctggagcgactcgagaagcaggccgaggtggccgcgcgctacaacacg
ctgcagggcgatgccacgaagaagcagcaccagctgtggttcctgaagcgcggcgagagc
gagaacgaccaggcgaaggtcaaggccgatgcgggcaaggcgctgaacgatctcgagtcg
cgcaccgccgatttgcgccgcatcgaatcggaactcgaaaccgtgcgccaggcgcactat
gccgccggcgaccatgtcaaccaggcccagggcaagctctacgaagcgagcgcagaagtc
ggccggctcgaaggcgagatccgcttcgtggtcgaagggcggcagcgggtggagcagcgc
cttgtccagttgcgcgaacagatcgcgcaatggggcacgcgccgtgaagatgccgaggcc
gaaatcgaaacgctggcgggccagggcgtcaccgccgaggagcaggccatcacgctggcc
gcgcaactggaagaccatgacgcacgcatgccggagctcgaagaagcgcagcaacgtgcg
cagaccgaagccaatgcccagcgcgcgacggtgacgcaggtgcagcagcagatccaggtg
ctggcggccgaccagcgcaacatcgaagaccagaaccgccagctcacgcagcgcagcgaa
cgccttcgcgccgacaagaacgccctggccgcacccgatgaagcacgtctgctcgaactg
caatcgcaactcgacgtggcacaggaatcctccgccgaagccgaagcccgcttgcaggag
cttcaagacaacgtaccgcaactcgacgacgaccgtcggacgcggcagcaggccgtcaac
accgagggcgcccgccatgccgagctgtcggcgcggctcgaggcgctgcgtgcgctgcag
gaaaaggtcaagaccgacggcaagctcgcgccgtggctcgcgaagcacggcctcgaaggc
ctgcaggggctgtggagccgcatccacatcgagcagggttgggagagcgccctcgaatcc
gcgctgcgagaacgcatgggcgcacttgaagtcagccggctcgagatggtgcgcgccttc
ggcaacgacgcgccgcccgccaagctcgcgttctacagtccgcccgccgcaggcgtgtcg
accgggcagggcgccttgccccgcctgtcggacctgcttcggctgaacgacgccggcctc
caggccttgctggtcgaatggctgcacggctgcctcacggcgcagagcttcgacgatgcg
atggcgcagcgcgaccagttgcagcccggcgaagtcatctatgtaaagagcggccatgcc
gtgtcgctgcacagcgtgagcttctacgcgcaggattccgagcaggccggcttgctggcg
cgccagcaggagatggaaaacctcgaccgtcagctgcgtgcccagaccctcatcaacgac
gagtcgcgcaccgcgttggtccgcgccgaggccgcatacgcggatgccgcttcgcggctg
gtcggtgcgcgccgtgaagccgccgaaacccagtcgcgcgcgcatgagctgcaggttgaa
accttgcgcctgtcgcaactggccgagcagacgcgcgcgcgcagcgagcagctcgccaac
gacctcggcgaggtcgatgcgcagctcgaagagttgcaggaaaagcggttcgccgccgag
tcgcgcttcgaggagctcgacatgcagctggccgacagccaggagcgccacgcgcaactc
gacgagcgcgtgatcgaagccggtcgtgcgctcaacgccgcgcgcgaacagcaccgcagc
ctggaacgccaggcacaggaggcgacgttctcgcaacgcacgctggaagcccgccgcggc
gagctgaaccgcgccatcgaaacggccgcgcagcagaacgtcgcgctggccgacgaagaa
gagcgcgctcgcgcggagttcggacgcctgtccgacgccgcagcccaggccggcctgcaa
gacgcgctgtcgctcaagctggaacgcgagaccgcgctcggcgcgacgcgcagccagtac
gacgacctcacgcagaagctgcgcgccagcgacgagcggcggctgacgctcgagcgcgag
ctcgatccgctgcgccagcgcatcaccgaattccagctgaaggaacaggccgcgcgtctc
ggcttcgagcagtaccagcagctgctgaccgatgcggaggccgatctcgaagcggtcgcg
ctgtccatcgacaccgacaaggtcaagctgaccggcctgcagggcgagatcgaccgtctg
caccgcgaagtcgccgcactcggcgcggtcaatctggcggcgctcgacgaactggccacg
gccaccgagcgcaagaccttcctcgacgcgcaatcggccgacctgaacgaggccatcggc
acgctggaagacgcgatacgcaagatcgacggcgagacccgcgaactgctgggcggcacc
ttcaaggtggtcaacgagcatttcagccgcatgttcccggagttgttcggcggcggcaat
gcgaggctcgtcatgaccggcgacgaaatcctcgatgccggcgtgcaggtgctcgcgcag
ccgcccggcaagaagaaccagaccatccatttgctctcgggcggcgagaaggcgctcacc
gcgattgcgctggtgttcgcgatcttccagctcaaccctgcgcctttctgcctgctggac
gaagtggatgcgccgctggacgacgccaacaccgagcgctatgccaaactcgtcaccgcc
atgagccgcgaaacccagttcctcttcatcagtcacaacaagatcgccatggaaatggcc
gaacagttgatcggcgtgacgatgcaggagcagggcgtgtcgcgcatcgtggcggtcgac
atggaatccgccgtgtcgctcgtcgaagctgcctga
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