Variovorax sp. PAMC 28711: AX767_20560
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Entry
AX767_20560 CDS
T04325
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
vaa
Variovorax sp. PAMC 28711
Pathway
vaa00280
Valine, leucine and isoleucine degradation
vaa00650
Butanoate metabolism
vaa00907
Pinene, camphor and geraniol degradation
vaa01100
Metabolic pathways
vaa01120
Microbial metabolism in diverse environments
vaa04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
AX767_20560
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AX767_20560
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AX767_20560
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AX767_20560
Enzymes [BR:
vaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
AX767_20560
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Motif
Pfam:
HMGL-like
CDC73_N
Motif
Other DBs
NCBI-ProteinID:
AMM26476
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Position
complement(4263434..4264384)
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AA seq
316 aa
AA seq
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MSAKEAIHITDVAPRDGLQNQAVHVGTAGKLRLIELLVEAGLKSIEATSFVSPKAVPQMA
DAADLVPQVQVRFPALRTSVLVPNLKGLERAHTAGAKEVAVVLSATETMNRRNINMGLAQ
ATEVSEQTLAAARALGLRTRAYIAVAFDCPFEGETPLDDVLRLAARMHAAAADEIVIADT
IGSASPAQVKERFAALCGVVPIERVAVHLHDTRGMAVANAWAALEAGVRRFDSSVGGIGG
CPFAPGAAGNVATEDLVLMAERSGFSTGISLDGLLAAVDFAQEELQRSLGGRAITWLRRQ
RDKNTQDKQDNNRRLA
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgaaggaagcgatccacatcaccgacgtcgcgccgcgagacggtctgcagaac
caggcagttcacgtcggcaccgcgggcaagctgcggctgatcgagttgctggtcgaggcc
ggcctgaagagcatcgaggcgacgagtttcgtctcgccgaaagccgtgccgcagatggcc
gacgcggccgacctcgtgccgcaggtgcaggtgcgctttcctgcgctgcgcacgtcggtg
ctggtgcccaacctcaagggcctggagcgcgcgcacaccgccggcgccaaggaggtcgcg
gtggtgctctcggccaccgaaaccatgaaccgccgcaacatcaacatgggcttggcgcag
gcgaccgaggtgagcgagcagaccctcgcggcggcccgcgcgctcggcctgcgcacgcgg
gcctacatcgcggtggcattcgattgtcctttcgaaggcgagacgccgctcgacgacgtg
ctgcgccttgcggcgcgcatgcacgccgcggcggccgacgaaatcgtcatcgccgacacc
atcggctcggcttcgccggcccaggtgaaagagcgcttcgcggcgctgtgcggcgtggtg
ccgatcgagcgcgtcgcggtgcacctgcacgacacgcgcggcatggccgtggccaacgcc
tgggctgcgttggaagccggcgtgcgccggttcgattcgagcgtcggcggcatcggcggc
tgcccgttcgcgcccggcgccgccggcaatgtcgccaccgaagacctcgtgctcatggcc
gagcgcagcggtttcagcaccggcatttcgctcgacggcttgctcgcagcggtggatttc
gcacaggaagaactgcagcggtcgctcggcggccgcgccatcacctggctgcgccgccag
cgcgacaaaaacacacaagacaaacaagacaacaaccggagacttgcatga
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