Vulcanimicrobium alpinum: WPS_00280
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Entry
WPS_00280 CDS
T09508
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vab
Vulcanimicrobium alpinum
Pathway
vab03030
DNA replication
vab03430
Mismatch repair
vab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WPS_00280
03430 Mismatch repair
WPS_00280
03440 Homologous recombination
WPS_00280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vab03032
]
WPS_00280
03400 DNA repair and recombination proteins [BR:
vab03400
]
WPS_00280
Enzymes [BR:
vab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WPS_00280
DNA replication proteins [BR:
vab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WPS_00280
DNA repair and recombination proteins [BR:
vab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WPS_00280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
AAA_30
AAA_16
AAA_assoc_2
AAA_5
Mg_chelatase
AAA_14
Rad17
AAA_19
Gp44_lid
DUF815
Motif
Other DBs
NCBI-ProteinID:
BDE04752
LinkDB
All DBs
Position
36876..38537
Genome browser
AA seq
553 aa
AA seq
DB search
MSLYRTWRPRTFADLVGQDAVVKTLTTALETGRLAHAYLFSGPRGSGKTSAAKILARCIE
CVNGPTAHPDNTCENCRAILDGTALDVLEIDAASNRGIDEIRALRDAVKFAPSTMRSKVY
IIDEAHMLTKEGANAFLKTLEEPPEWAVFVLATTAPEALPPTILSRCQRYAFRRIAIPTM
IARMREIADAEGIAIADAALGAIAYRADGGLRDALTMLEQVAAFAGGPVDAEVVDAAFGQ
TGREFARALRDAALDGDAAAALRIVDDASDGGADMAGLIRSTIAEFRHLLVARVNPELLA
RDLAEDDAAAARSRAAATPQARLVRALRLLGEALAAARSSGNARLEIESALLRFILQGED
PTLDALAARVAALESGAPGLPHSAAERAPAPPPRAEPAPVRTTVANPPSPPAAAAVPQPP
AAVPHPPAPEQAVPQPAVPAMDLSLQKLRTLWQSIRTRAEGEKSSLRAGLSRAAVAALDG
DTLTLNAPDAIAADMLKRDLPTVKKAIADVTGRALEVRVALNQASPPSATGDSGGDDEAE
HDDLMRYALEKLP
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgctgtaccggacttggcggccgcggacgttcgccgacctggtcgggcaggacgcc
gtggtcaagaccctcaccaccgcgctcgagaccggccgcctcgcccacgcctacctcttc
tcgggcccgcgcggctcggggaagacctcggccgcgaagatccttgcgcgctgcatcgag
tgcgtgaacgggccgacggcgcacccggacaacacgtgcgagaactgccgcgcgatcctc
gacggcaccgcgcttgacgtgctcgagatcgacgcggcgtcgaaccgcgggatcgacgag
atccgcgcgctgcgcgacgcggtgaagttcgcgccgtcgacgatgcgcagcaaagtctac
atcatcgacgaagcgcacatgctcaccaaagaaggcgcaaacgcgtttctcaaaacgctg
gaggagccgccggagtgggcggtcttcgtgcttgcgacgacggcgcccgaagcgctgccg
ccgacgatcctctcgcgctgtcagcgctatgcgttccggcgcatcgcgatcccgacgatg
atcgcgcggatgcgcgagatcgcggatgccgaggggatcgcgatcgccgacgccgcgctg
ggagcgatcgcataccgcgccgacggcggcttgcgcgacgcgctgacgatgctcgagcag
gtcgcggcgttcgccggaggccccgtcgacgcggaggtggtcgacgccgcgttcgggcag
accggccgcgagttcgcgcgggccctgcgcgacgccgcgctcgacggcgacgccgcggcg
gcgctgcggatcgtcgacgacgcctccgacggcggcgccgacatggccggactgatccgc
agcacgatcgccgagttccgccacctgctggtcgcgcgggtcaaccccgaactgctcgcc
cgcgatctggccgaggacgatgctgcggctgcccgcagccgcgccgccgccacgccgcag
gcccgcctggttcgcgcgttgcgcctgctcggagaggcgctcgccgccgcccgctcgtcg
ggcaacgcgcggctcgagatcgaaagcgcgcttctgcgcttcattctccagggcgaagac
ccgacgctcgacgcactcgccgcccgcgtcgctgccctcgaatccggcgcgcccggcctg
ccgcactcggccgccgagcgcgcccccgccccgccgccgcgggcggagccggcccccgtg
cgcacgaccgtcgccaatccgccgtccccacccgcggccgccgcggtgccgcagccgccc
gccgcggtgccgcacccgcccgcgcccgagcaggccgtgccgcaaccggcggtcccggcg
atggacctctccctgcagaagctgcgcacgctctggcagagcatccgcacgcgcgccgag
ggcgagaagagcagtctgcgcgccgggctctcgcgggctgccgtcgccgcgctcgacggc
gacaccctcaccctcaacgcgcccgacgcgatcgccgccgacatgctcaagcgcgacctc
cccacggtgaagaaggcgatcgcggacgtcaccggccgcgcgctcgaggtgcgggtcgcg
ctgaaccaggcgtcgccgccgtccgccaccggcgattccggcggcgacgacgaagccgag
cacgacgacttgatgcgctacgcgctcgagaaacttccctaa
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