KEGG   Vulcanimicrobium alpinum: WPS_06360
Entry
WPS_06360         CDS       T09508                                 
Symbol
nfo
Name
(GenBank) putative endonuclease 4
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
vab  Vulcanimicrobium alpinum
Pathway
vab03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    WPS_06360 (nfo)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vab03400]
    WPS_06360 (nfo)
Enzymes [BR:vab01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     WPS_06360 (nfo)
DNA repair and recombination proteins [BR:vab03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     WPS_06360 (nfo)
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: BDE05360
UniProt: A0AAN1XTE1
LinkDB
Position
626437..627282
AA seq 281 aa
MRIGFHVRVGGGYDAAVAYATKHGCSSLQFFSGNPKTYRIGAIDAPALAKFAAARTAAGV
TPVAIHTSYLINLATDDPKIANGSLRLLKNDLAVAAAGDVAYVNTHLGSYGKRDRKEGFA
AVVAALEDALEGIAPQVSLVMENSAGAGALCGGTMEELGALVRAVGHPNLRVCIDTAHTW
AAGYAIDTPDGVAAFFDHVEREIGLERIVMFHFNDTEIELGGHRDRHWHIGEGRIGIAGF
RAIVAHPGVQGKVAILETPGEEGDDARNIAALRTVLEGVGA
NT seq 846 nt   +upstreamnt  +downstreamnt
atgcgcatcggcttccacgtgcgcgtcggcggcggctacgatgctgccgtcgcgtacgcg
acgaaacacggctgctcgtcgctgcagttcttcagcggcaaccccaagacgtatcggatc
ggcgcgatcgatgcgcctgcgctggccaagttcgcggccgcacgaacggcggccggcgtc
acgccggtcgcgatccacacctcgtacctgatcaaccttgcgaccgatgatccgaagatc
gcgaacggttcgctgcgcctgctcaagaacgatctggcggtcgccgccgccggcgacgtc
gcctacgtcaacacgcatctcggttcgtacggcaagcgcgatcgcaaggaaggtttcgcg
gcggtcgtcgccgccctcgaggatgcgctcgaggggatcgctccgcaggtctcgctggtg
atggagaacagtgccggggccggtgcgctgtgcggcgggacgatggaggagctgggcgcg
ctggtgcgtgcggtcgggcatccgaacctgcgcgtctgcatcgacaccgcacacacctgg
gcggcgggatacgcgatcgacacgcccgacggcgtcgcggcgtttttcgaccacgtcgag
cgggaaatcggtctcgagcggatcgtgatgtttcatttcaacgacaccgagatcgagctg
ggtggtcaccgggatcgtcactggcacatcggcgaaggacggatcgggatcgcaggcttc
cgcgccatcgtggcgcatccgggggtccagggaaaggttgcgatcctggaaacaccgggt
gaagagggcgacgatgcgcgcaacatcgccgccctgcgcaccgtgctggagggagtcggc
gcatga

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