Vulcanimicrobium alpinum: WPS_07790
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Entry
WPS_07790 CDS
T09508
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
vab
Vulcanimicrobium alpinum
Brite
KEGG Orthology (KO) [BR:
vab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vab03009
]
WPS_07790 (rimO)
Enzymes [BR:
vab01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
WPS_07790 (rimO)
Ribosome biogenesis [BR:
vab03009
]
Prokaryotic type
ribosomal protein modification factors
WPS_07790 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
BDE05503
UniProt:
A0AAN2C913
LinkDB
All DBs
Position
775584..776957
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AA seq
457 aa
AA seq
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MTKTVSFVSLGCAKNLVDSEVMIAKLGAAGWTLVPETEQAEAVVINTCAFIDPAKAESTQ
TILAHAEKKRDGQQLIVAGCLSQRFGDELQSLIPEIDGVVGTGAYPSIVELLEDARAGKG
PVRLDFEAEPEHDFLPRLITTPSATAYLKIAEGCDHPCTFCIIPQLRGGFRSRSEESILA
EARALAAGGTKELILIAQDTSMWGRDRGYRRGGLAALLEKLHAIDGIVWIRLLYLYPATV
DAELIDAMASLPKVCSYMDMPLQHVSAGVLRRMLRPSNGERYLEIVEDFRRRVPGITMRS
TFIVGFPGENDEDVAELERWIGRAELDRVGFFVYSREDGTPGAELDRQVPEREKRRRLLR
LRDAQRRASERARAKRIGETVQVLVEEKRTLRKTDPLAAALRSRHVIAGRSSGEAPGVDG
IIAFTGDAEIGEFVDVTLRGNTSFDFYGDLVPALVPA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagacggtctcgtttgtgtccttgggttgtgcgaagaatctcgtggacagcgag
gtgatgatcgcgaagctgggggcggcggggtggacgcttgtgccggagacagagcaggcg
gaggcggtcgtcatcaacacgtgcgcgttcatcgacccggcgaaggcggagtcgacccag
acgatcttggcgcacgcggagaagaagcgggacggacagcagctgatcgttgcggggtgt
ttgtcgcagcggttcggggatgaactgcagtcgctgattcctgagatcgacggcgtcgtc
ggaacgggagcctatccgtcgatcgtcgagttgctggaggatgcgcgggccggcaagggc
ccggtccggctcgatttcgaggcggagccggagcatgattttctgccgcggctgatcacg
acgccgtccgcgacggcgtatctgaagatcgcggaaggatgcgatcatccgtgcacgttc
tgcatcattccgcagctgcgcggcgggtttcggtcgcgcagcgaggagtcgattctggcg
gaggcgcgtgcgctcgctgcgggcgggacgaaagaactgattctgatcgcgcaggacacg
tcgatgtggggacgcgatcgcgggtatcggcgcggcggccttgcggcgctgctcgagaag
ctgcacgcgatcgacggcatcgtgtggattcggctgctgtatctgtatccggcgaccgtc
gatgcggagctgatcgatgcgatggcgtcgctcccgaaggtgtgctcgtacatggacatg
ccgctgcagcacgtcagcgccggcgtgctgcggcggatgctgcggccgtccaacggcgag
cggtatctcgagatcgtcgaggactttcggcggcgcgttccggggatcacgatgcgctcg
actttcatcgtggggtttcccggcgagaacgacgaggacgtcgcggaactcgaacgctgg
atcgggcgcgccgagctcgatcgcgtcgggttcttcgtctattcgcgtgaagatgggacg
ccgggcgcggaactcgaccgccaggtgccggagcgcgagaagcggcgccggctgctgcgt
ctgcgcgacgcgcagcggcgtgcgtcggagcgcgcgcgcgcgaagcgcatcggcgagacc
gtgcaggtgctggtcgaggagaagcggacgctgcgcaagactgatccgcttgcggcggcg
ctgcgctcgcgccacgtgatcgccggacgttcgagcggcgaagcgccgggagtcgatggg
atcatcgcgttcaccggagacgccgagatcggcgagttcgtcgacgtcacgctgcgcggc
aatacctcgttcgatttctacggcgatctcgtgccggcgctggtgccggcgtga
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