Vulcanimicrobium alpinum: WPS_08640
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Entry
WPS_08640 CDS
T09508
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
vab
Vulcanimicrobium alpinum
Pathway
vab02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
vab00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
WPS_08640 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vab03021
]
WPS_08640 (sigA)
Transcription machinery [BR:
vab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WPS_08640 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
LexA_DNA_bind
Exonuc_VII_L
Sigma70_r4_2
KORA
Tox-URI2
Motif
Other DBs
NCBI-ProteinID:
BDE05588
UniProt:
A0AAN1XWI3
LinkDB
All DBs
Position
866840..868009
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AA seq
389 aa
AA seq
DB search
MARTKKSAGENAETPQLSLDEQIKKLLEKGKKRGTLTYEEINAVFDNVEDVAPERMDDLL
EEIASLGIEIVEEQAKDEKPSDDGEKEEEGIPAGLALDDPVRMYLKEIGRVPLLSMDDER
RLAMSIEAGEKEALKNGTADNRIVLDGEESKRKLTEANLRLVVSIAKKYVGRGMLFLDLI
QEGNLGLIRAVEKFDYRKGYKFSTYATWWIRQAITRALADQARTIRIPVHMVETINRLIK
ISRQLLQELGRDPTVEEIANEMGLTPEKVREVIKISQEPISLETPIGEEEDSHLGDFIED
QEAVAPAEAASVMLLKEKMQDVLKNLTERERKVLVLRFGLEDGHQRTLEEVGQEFGVTRE
RIRQIEAKALRKLRHPSRGKALKDYWSNE
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcacgaaaaaatccgccggcgaaaacgccgagacaccgcagctctcgctcgac
gagcagatcaaaaaactgctcgaaaaaggcaagaagcgcggcacgctgacctacgaagag
atcaacgccgtcttcgacaacgtcgaagacgtcgcgccggagcgcatggacgatctcctc
gaagagatcgcgtcgctcgggatcgagatcgtcgaagaacaggccaaagacgagaagccc
tcggacgacggagaaaaagaagaagaagggattccggctggtctcgccctcgacgatccg
gtccggatgtatctcaaagagatcggccgcgtcccgctcttgtcgatggacgacgagcgc
cgcctcgcgatgtcgatcgaagccggcgaaaaagaagcgctcaagaacggcaccgccgac
aaccgcatcgtcctcgacggcgaagaatcgaagcgcaagctcaccgaagcgaaccttcgt
ctggtcgtctcgatcgcgaagaagtacgtcggccgcggcatgctctttctcgacctgatc
caggaagggaatttgggcttgatccgtgcggtcgagaagttcgattaccgcaagggctac
aagttctcgacgtacgccacatggtggatccgccaggcgatcacccgcgcgctcgccgac
caggcgcgcacgatccgcatcccggtccacatggtcgagacgatcaaccgtctgatcaag
atcagccgccagctgctgcaagagctgggccgcgatcccacggtcgaagagatcgccaac
gagatggggctgaccccggagaaggtccgcgaagtcatcaagatctcgcaggagccgatc
tcgctcgagacgccgatcggcgaagaagaagactcgcaccttggcgacttcatcgaagat
caggaagccgtcgcgccggccgaagccgcctccgtcatgctcctcaaagagaagatgcag
gacgtgctcaagaacctcaccgagcgcgagcgcaaggtgctggtcttacgcttcggtctc
gaagacggccaccagcgcacgctggaagaagtcggccaggagttcggggtcacgcgcgag
cgcatccgccaaatcgaagcgaaggcactgcgcaaactccgccaccccagccgcggcaaa
gccctcaaagactactggtccaacgaataa
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