KEGG   Vulcanimicrobium alpinum: WPS_09270
Entry
WPS_09270         CDS       T09508                                 
Name
(GenBank) AMP-dependent synthetase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
vab  Vulcanimicrobium alpinum
Pathway
vab00061  Fatty acid biosynthesis
vab00071  Fatty acid degradation
vab01100  Metabolic pathways
vab01212  Fatty acid metabolism
vab02024  Quorum sensing
vab04146  Peroxisome
Module
vab_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:vab00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    WPS_09270
   00071 Fatty acid degradation
    WPS_09270
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    WPS_09270
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    WPS_09270
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:vab01004]
    WPS_09270
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vab04147]
    WPS_09270
Enzymes [BR:vab01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     WPS_09270
Lipid biosynthesis proteins [BR:vab01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   WPS_09270
Exosome [BR:vab04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   WPS_09270
  Exosomal proteins of breast cancer cells
   WPS_09270
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: BDE05651
UniProt: A0AAN2C949
LinkDB
Position
complement(934906..936702)
AA seq 598 aa
MTRPDPLPTLPAFIAERLSVPRAIALAERHGGTTRALSSGDVHRRASAIACALRARGIER
GDRVAILSENCVDWLVADFGILYAGAVVVPMFATSAQDQIAYIFANSETKFAFVENAGAA
AHVREAVPAPPPLVSFAGDTELGIEALVAEGEALLDADPSQLATFTAQTALDDLAVLIYT
SGTTGTPKGVMLSHRNLSSNVHDAFDPDLSDLKEGESALSVLPFAHIFEHTDALGYLYNL
ATIYVTTPERLLEDLRAIRPSHVAFVPRIFERLIAGIVGNARVQGGVKAKLVPWAIEAGV
AYERALRDGFVNPVLRVQNALAQALVLKRIKPALGLDRLGYFVSGSAPLHRDTALALAAL
GLPVCEGYGLTETSPVVTVNRPSNVKLGTVGTPIRNVEVKIAHDGEILVKGPNVMLGYYQ
LPPAEQPFTADGFFQTGDIGRFDGEHLVITDRKKELFKSSGGKWISPSRIETAIKRSIYV
GQVMAFGDDKPHPAVLVAPNWDLIRKELELGAMTTAAMATDDRVRTLVIREVETHTADLA
AFEQVRRVALLPRDLTIEDDELSPTLKVKRRVVERRYAALIEQAYTEDLHQRNALLHV
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgacgcgccctgatccgctgcccactcttccagccttcatcgccgagcggctctccgtg
ccgcgcgcgatcgccctggcggagcggcacggcggcacgacacgggcgctcagcagcggc
gacgtccaccggcgtgcctccgcgatcgcttgcgccctgcgggcgcgcgggatcgagcgg
ggcgatcgggtcgcgattctctcggagaactgcgtcgactggctggtcgccgacttcggg
atcctctacgcgggcgccgtcgtcgtccccatgttcgcgacgagcgcccaggaccagatc
gcttacatcttcgcgaacagcgaaaccaagttcgcgttcgtcgaaaacgccggcgccgcg
gctcacgtgcgcgaagcggtccccgcgccgccgccgctggtcagcttcgcgggcgatacg
gagctcgggatcgaggcgctggtcgccgagggcgaagccctgctcgacgccgatccctcg
cagctggcgacgtttaccgcgcagaccgcgctcgacgatctcgccgtgctcatctacacg
tcggggacgaccggtacgccgaagggcgtgatgctctcgcatcgcaacctcagctccaac
gtccacgacgcgttcgaccccgatctcagcgacttgaaggagggcgagagcgcgctctcc
gtgctgcctttcgcgcacatcttcgagcacaccgacgcgctcggctatctctacaacctc
gcgacgatctacgtgacgacgccggaacggctgctcgaggatctccgggcgatccgcccg
agtcacgtcgcgttcgtgccgcgcatcttcgaacggctgatcgccggcatcgtcggaaac
gcgcgcgtccagggcggcgtaaaagcgaagctggtcccgtgggcgatcgaagcgggcgtc
gcctacgagcgcgcgctgcgcgacggattcgtcaatcccgtgcttcgcgtgcagaacgcg
ctcgcgcaggcgctcgttctgaaacgcatcaagccggcgctaggcctcgaccgtctcggc
tacttcgtgagcgggagcgcgccgctgcaccgcgacacagcgctcgcgctcgccgcgctg
gggcttccggtctgcgagggctacggcctcaccgagacgtcgcccgtcgtcaccgtcaac
cggccgtcgaacgtcaaattgggaacggtcggaacgccgatccgcaacgtcgaggtgaag
atcgcccacgacggcgagatcctcgtcaaggggcccaatgtcatgctcggctactaccaa
ttgccgcccgcggaacagccgttcaccgccgacgggttcttccagaccggcgacatcgga
cggttcgacggcgagcatctcgtcatcacggatcgcaaaaaggaactcttcaagtcgagc
ggcggcaagtggatctcgccctcacgcatcgagaccgcgatcaaacgctcgatctacgtc
ggtcaggtgatggcgttcggcgacgacaagccgcatccggcggtgctggtggcgccgaac
tgggatctcatccgcaaagaactcgaactcggcgcgatgacgaccgccgcgatggcgacc
gacgaccgcgtgcgcacgctcgtgatccgcgaagtcgagacgcacaccgccgacttggcg
gcgttcgagcaggtgcgccgggtcgcgcttcttccgcgcgacctgacgatcgaagacgac
gaactctcgccgacgctgaaggtgaagcggcgcgtggttgagcggcgctacgcggcgctc
atcgagcaggcgtacacggaagatctgcaccagcgcaacgcgctgctccacgtgtaa

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