Vulcanimicrobium alpinum: WPS_11490
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Entry
WPS_11490 CDS
T09508
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vab
Vulcanimicrobium alpinum
Brite
KEGG Orthology (KO) [BR:
vab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vab03032
]
WPS_11490 (topA)
03400 DNA repair and recombination proteins [BR:
vab03400
]
WPS_11490 (topA)
Enzymes [BR:
vab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
WPS_11490 (topA)
DNA replication proteins [BR:
vab03032
]
Prokaryotic type
DNA Topoisomerases
WPS_11490 (topA)
DNA repair and recombination proteins [BR:
vab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
WPS_11490 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BDE05873
UniProt:
A0AAN1XWY7
LinkDB
All DBs
Position
1149025..1151199
Genome browser
AA seq
724 aa
AA seq
DB search
MAKPLIIVESPTKAKTIKKFLPPRYVVKASVGHVRDLPKSTLGVDVLNDFSPRYLTIKGK
GDVIKDLKAAVKSASGQVYLATDPDREGEAIAWHLAELLKLQDPMRIELHEITKDAALAA
IKDPHPIDMPRVNAQQARRILDRLVGYKISPLLWAKVRGGLSAGRVQSVAVRLIVDRERE
IRAFVPREYWSITAQLAAHESPIVFGADLHQIDGQKAEIVNGEQAEAIMAALDGAAFRVA
SVKTRETKRNPAAPFTTSTLQQEASRKLKFRVRKTMQIAQALYEGVDLGGSEGTQGLITY
MRTDSTRIADSAREAAREFVVARFGESFYGGGRQFKIKEGAQDAHEAIRPTAAMRTPDSL
AGVLKRDELRLYQLIWERFIASQMAPAVFDQTTVDIAAAQRFTFRATGSVLRFAGYTAVY
EEGTDDAAAPADGAPAQNGKAAKKQPILPKLSESEDLDVKSIEPKQHFTEPPPRFTEATL
VRALEENGIGRPSTYSAIVETIQARGYVEQVERRFHPTEIGESVNDLLAEHFKDIVDLKF
TASMEAKLDELAEAGGDWESTARVLADFYGPFSLELEEAERKLPKFEQRDEPTDEVCVNC
GKPMVIKTGRFGKFMSCTGYPECKTTKPILKDSGAICPKDGGMIAERKSRKGRTFFGCAN
YPACDFVSWDRVAKERCAVCGDYVTEKPKRGGAVTYICHTDRTHATGLGTADDADEAEAE
TAPA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaagccgctgatcatcgtcgagtcgccgacgaaagcaaaaaccatcaagaaattc
ttaccgccgcgttacgttgtaaaggcgtcggtcgggcacgtccgcgacttgccgaagtcg
acgctgggcgtcgacgtcctcaacgatttctcgccgcggtacctgactatcaaaggaaag
ggcgacgtcatcaaggacctcaaggccgccgtcaaatcggcgtccggccaggtctatctc
gcgaccgaccccgatcgcgaaggcgaggcgatcgcgtggcatctcgccgagctgctcaaa
ctccaagacccgatgcggatcgagctccacgagatcaccaaggacgcggcgctcgcggcg
atcaaggacccgcaccccatcgacatgccgcgcgtcaacgcgcagcaggcccggcgcatc
ctcgaccgcctcgtcggctacaagatctcgccgctgttgtgggcgaaagtccgcggcggc
ctctcggcggggcgcgtgcaatccgtcgcggtccggctcatcgtcgatcgcgaacgcgag
atccgcgcgttcgttccgcgcgagtattggtcgatcaccgctcagctcgcggcgcacgaa
tcgccgatcgtcttcggcgccgacctgcatcagatcgacggccagaaggccgagatcgtc
aacggcgagcaggccgaagcgatcatggccgcgctcgatggcgccgcgtttcgcgtcgcg
tcggtcaagacgcgcgagaccaagcggaatccggcggcgccgttcaccacctcgacgctc
cagcaggaggcgtcacggaagctgaagttccgcgtgcgcaagacgatgcagatcgcgcag
gcgctgtacgaaggcgtcgatctgggcggatccgaggggacgcaggggctcatcacctac
atgcgcaccgactcgacgcgcatcgccgactccgcgcgggaagcggcgcgcgagttcgtc
gtcgcccgcttcggcgagagcttctacggcggcggacgccagttcaagatcaaagagggc
gcccaggacgcgcacgaagcgatccgtccgaccgccgcgatgcgcacccccgactcgctc
gccggcgtcctcaagcgcgacgaactgcggctctatcagctgatctgggagcgcttcatc
gcctcccagatggcgcccgccgtgttcgatcagacgaccgtcgatatcgcggccgcgcag
cggttcacgttccgcgccaccgggagcgtcctcaggttcgccggctacaccgcggtgtac
gaggaagggaccgacgatgcggcggccccggccgacggcgccccggcacagaacggaaag
gccgcgaagaagcagccgatcctgccgaagctcagcgagtccgaagacctcgacgtgaag
tcgatcgagcccaagcagcacttcaccgaaccgccgccgcgcttcaccgaagcgacgctg
gtgcgcgcgctcgaggagaacgggatcgggcgtccgtcgacatacagcgcgatcgtcgag
acgatccaggcgcgcggatacgtcgagcaggtcgaacgccgcttccatcccaccgagatc
ggcgagtcggtgaacgatctgctcgccgaacacttcaaggacatcgtcgatctcaaattc
accgcgtcgatggaagcgaagctcgacgaattggcggaggccggcggcgactgggaatcg
acggcgcgcgtcctcgcggacttctacggcccgttctcgctcgagctcgaagaggctgag
cggaagctcccgaagttcgaacagcgcgacgagccgaccgacgaggtgtgcgtgaactgc
gggaagccgatggtgatcaagaccgggcgcttcgggaagttcatgtcgtgcacgggctat
cccgagtgcaaaacgaccaaaccgatcctcaaagactcgggcgcgatttgccccaaggac
ggcgggatgatcgccgaacgcaagtcgcgcaagggccgaacgttcttcggctgcgccaac
tacccggcgtgcgacttcgtgtcgtgggaccgggtcgcgaaggagcgctgcgcggtctgc
ggcgactacgtcaccgagaagccgaaacgcggcggtgccgtcacgtacatctgccacacg
gatcgcacccacgcaaccggcctcgggaccgccgacgacgccgacgaggcggaggccgag
acggcgccggcatga
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