Vulcanimicrobium alpinum: WPS_12870
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Entry
WPS_12870 CDS
T09508
Symbol
ligC
Name
(GenBank) ATP-dependent DNA ligase
Organism
vab
Vulcanimicrobium alpinum
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
Motif
Other DBs
NCBI-ProteinID:
BDE06011
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Position
complement(1284487..1285515)
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AA seq
342 aa
AA seq
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MVDAQYAPMEMRAVDAIPEGPAWQYEPKWDGFRALVHRDGDRVAITSKNGQPLARYFPEV
VAALAALGADGFSLDGELVVPVAGAFSFDTLQQRIHPAASRVQMLARKTPALYLVFDLLR
EEGADRVGEPLERRREALERFMHANAEEHGTLRLSPATRDRAVVDRWFAEVGGALDGVIA
KRLGVPYASGRRDAAVKIKKQRTADCVVGGFCYAAGSTDRVGSLMLGLYDDAGLLDYIGF
CSSFSTAERRALLERLLPHAGGSGFTGGAPGDAPSRWSRDPERDRSYVALAPELVLEVGF
DQVTGGRIRHGTRPLRWRTDKAPRSCTVDQLETAGAVLSLIR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacgcgcagtacgcgccgatggagatgcgcgcggtcgatgcgatccccgaaggt
ccggcgtggcagtacgagcccaagtgggacggattccgcgcgctcgtgcaccgcgacggc
gaccgcgtcgcgatcacctcgaaaaacggccagcccctcgcgcgctacttccccgaggtc
gtcgcggcgctcgccgcgctcggcgccgacggcttttcgctcgacggcgaactcgtcgtc
ccggtcgcgggcgcgttttcctttgataccctgcagcagcggatccatccggcggcgagc
cgcgtgcagatgctcgcgcggaagacgccggcgctctacctcgtcttcgatctgctgcgc
gaggagggcgcagaccgcgtcggcgagccgctcgaacgccggcgcgaagcactggaacgg
ttcatgcacgcgaacgccgaggagcacgggacgctacggctgagcccggcgacgcgcgac
cgggccgtcgtcgaccgctggttcgccgaggtcggcggcgcgctcgacggcgtgattgcg
aaacggctcggcgtgccgtacgccagcggtcggcgcgacgcggcggtgaagatcaaaaag
cagcgcaccgcggattgcgtcgtcggcggcttctgctatgcggccggcagcacggaccgc
gtcggcagcctgatgctcgggctctacgacgacgccggtctgctcgactacatcggattc
tgcagcagtttctcgacggccgagcggcgcgcgctgctcgaacggctcctcccgcacgcc
ggcggctcggggttcaccggcggcgcgccgggcgatgcgccgtcgcggtggagccgcgac
ccggagcgcgaccgttcctacgtcgccctggcgccggagctggtgctggaagtcggcttc
gatcaagtgacgggcggccgcatccgccacgggacacggccgctgcgctggcgcacggac
aaggcgccgcgctcgtgcacggtcgaccagttggagaccgccggggcagttctttcctta
atccgctga
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