Vulcanimicrobium alpinum: WPS_15280
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Entry
WPS_15280 CDS
T09508
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vab
Vulcanimicrobium alpinum
Brite
KEGG Orthology (KO) [BR:
vab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vab03400
]
WPS_15280
Enzymes [BR:
vab01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
WPS_15280
DNA repair and recombination proteins [BR:
vab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
WPS_15280
Prokaryotic type
WPS_15280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BDE06252
UniProt:
A0AAN2CA38
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All DBs
Position
1501020..1502447
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AA seq
475 aa
AA seq
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MARAVFAFTRDLRLNDHAGLAAAARHGVVVPVHVIDPVSAARLRRSPRRAAYYCAAIRAL
DASLRARGSALIVRRGNAGPVLRALARALGAGVVAWSCGYDAKTIRRDRDLQSTLEEAGL
RALPMHDGPAIPPEDAAAAHSRGDGYRAFVPYHARWRTLLPPQDAGSASFAAVEIASEAL
PIPEEFGSQAPLPGDAGEDAARAKLRTFLQSAVLQYGVARNVPAARETSRLSAELSFGTI
AAREVVRSACERAADPFLLAEERASLRLYLRALAERDFFLQLAWYNESLAEEPLQPKMRR
FAFARTHPHLDAWRSGRTGFALVDAGIRELRATGWMHPRVRAIAAAFLCFDLGVDWRIGR
DEWDVYLVEDDPALAAGNWQWIAGVGADLAAYPRIYNPVKQARRFDPAAEYIRTWIPELA
GQPDVAILDPGLGGREQQLPLPLFGTRSYPPPVLDHETAARAFLERYAREVRTPA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcgggcggtgttcgcatttacgagggacctgcggctgaacgatcacgcggggctc
gccgcggcggcgcgtcacggcgtcgtcgtccccgttcacgtgatcgatccggtgagcgcc
gcgcgtttgcgccgctcgccgcggcgcgccgcgtactactgcgcagcgatccgcgcgctc
gacgcgtcgctgcgcgctcgggggagcgcgctcatcgtgcggcgcggcaacgcgggaccc
gtgctgcgtgcgctcgcgcgcgcgctcggcgccggcgtcgtcgcctggagctgcggctac
gacgcgaagacgatccggcgcgaccgcgacctgcagtcgacgctcgaggaggcggggctg
cgcgcgctgccgatgcacgacgggccggcgatcccgcccgaagacgcggcggctgcgcat
tcgcgcggtgacggctatcgtgcgttcgtcccgtatcacgcgcgctggcgcaccctgctc
ccgccgcaggacgccggcagcgcgtcgttcgccgccgtcgagatcgcgagcgaagcgctc
ccgatccccgaagagttcggctcgcaggcgccgctgcccggcgacgccggcgaagacgcg
gcgcgcgcgaaactgcgcacgtttctgcagtccgccgtcctgcagtacggcgtcgcgcgc
aacgtccccgcggcgcgtgaaacgtcgcggctctcagccgaactctcgttcgggacgatc
gcggcgcgcgaggtcgtgcgctccgcgtgcgagcgcgccgccgatccgtttctgctcgcg
gaggagcgcgcctcgctgcgtctgtacctgcgcgcgctcgcggagcgagatttctttctg
cagctcgcgtggtacaacgagtcgctcgcggaggaaccgctgcagccgaagatgcggcgc
ttcgcgttcgcgcggacgcatccgcatctggatgcgtggcgcagcgggcgcaccgggttc
gcgctcgtcgacgccggcatccgcgaactgcgcgcgaccggttggatgcacccgcgcgtg
cgcgcgatcgcggcggcgtttttgtgcttcgatctgggcgtcgactggcggatcggccgc
gacgagtgggacgtgtacctcgtcgaagacgatcccgcgctcgccgccggaaactggcag
tggatcgcgggcgtcggcgccgatctggccgcctatccgcgcatctacaatccagtgaag
caggcgcgccgcttcgatcccgccgccgagtacatccgcacgtggatccccgaactcgcc
ggccagcccgacgtcgcgatcctcgatccgggcctcggcggccgcgaacagcaattgccg
ctgccgctgttcgggacgcgttcgtatccgccgccggtgctcgaccacgaaaccgcggcc
cgcgcgttcctcgagcgctacgcgcgcgaagtgcgcacgcccgcctga
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