Vulcanimicrobium alpinum: WPS_19040
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Entry
WPS_19040 CDS
T09508
Name
(GenBank) hypothetical protein
KO
K03090
RNA polymerase sigma-B factor
Organism
vab
Vulcanimicrobium alpinum
Brite
KEGG Orthology (KO) [BR:
vab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vab03021
]
WPS_19040
Transcription machinery [BR:
vab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WPS_19040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
Sigma70_r2
HTH_Crp_2
HTH_3
Sigma70_r3
MarR_2
HTH_23
HTH_24
MarR
HTH_10
HTH_31
GerE
HTH_IclR
HTH_AsnC-type
Sigma70_ECF
Xre-like-HTH
HTH_37
KORA
Motif
Other DBs
NCBI-ProteinID:
BDE06628
UniProt:
A0AAN2CA58
LinkDB
All DBs
Position
1855594..1856304
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AA seq
236 aa
AA seq
DB search
MICRHEALTRYCSDRSVDHRNAVIDAYRYLCRRGAKKFLRAGSDRADLEQVAAVGLIKAA
EYYRAEMRTPFDAYAWIMIVGELMHYVRDHERLVRIPRPLRALEKRFLDAWDALCAARHR
EPTSAEIAAVLGVSIETVTELRALRRTEHVGLPEPSSTDGPERVDLLADTSAIPLEDRVA
LTLALAELGERERTIVLGTYGAGLTQAELGKRLGLSQSHVSKLLARALGKLGRRVA
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgatctgccgccacgaggcgctcacgcgctattgctccgaccgcagcgtcgaccatcgc
aacgccgtgatcgacgcctatcgctatctgtgccggcgcggcgcgaagaaatttctacgc
gccggcagcgaccgcgccgacctcgaacaggtcgccgcggtcggactcatcaaggcggcc
gagtactatcgcgccgagatgcgcaccccgttcgatgcctacgcctggatcatgatcgtc
ggcgaactgatgcactacgtccgcgatcacgagcggctcgtgaggatcccccgccccctg
cgggcgctcgagaagcggttcctcgacgcgtgggacgcgttgtgcgcagcccgccatcgc
gaaccgacctcggccgagatcgccgcggtcctcggggtctcgatcgaaacggtgacggag
ctgcgcgcgctgcggcgcaccgaacacgtcggcctcccggagccgtcgtcgaccgacggc
cccgaacgcgtcgacctgcttgccgacacgagcgcgatcccgctcgaagaccgcgtcgcg
ctcaccttggcgctggccgaactcggcgagcgcgaacgcacgatcgtcctgggcacctac
ggcgccgggctcacccaggccgaactcgggaaacgcctgggtctctcgcaaagccacgtc
tcgaaactgctcgcacgcgcgctcgggaagctgggccgccgcgtcgcctga
DBGET
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