Vulcanimicrobium alpinum: WPS_20820
Help
Entry
WPS_20820 CDS
T09508
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vab
Vulcanimicrobium alpinum
Pathway
vab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WPS_20820 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vab03019
]
WPS_20820 (recQ_2)
03400 DNA repair and recombination proteins [BR:
vab03400
]
WPS_20820 (recQ_2)
Enzymes [BR:
vab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WPS_20820 (recQ_2)
Messenger RNA biogenesis [BR:
vab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WPS_20820 (recQ_2)
DNA repair and recombination proteins [BR:
vab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WPS_20820 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
HHH
Motif
Other DBs
NCBI-ProteinID:
BDE06806
LinkDB
All DBs
Position
complement(2034639..2036462)
Genome browser
AA seq
607 aa
AA seq
DB search
MVEAATLREALERWFGFPSFRPSQEAIVRDVLDGRDVFALLPTGGGKSLCYQLPAVLTDG
LTVVVSPLIALMKDQVDALDTAGIPATSLNSSLEYSDLRRRLDGLERGAYRLLYVAPERL
TLPGFVDDLERWGIARVVVDEAHCISEWGHDFRPEYRRIAPLRDRFPDVPFCAFTATATA
RVRDDVVAQLGLRRPAVHVASFDRPNLTYRVMHGTRGIDELVRWLRTRPDDDAGIVYAGS
RANTEKLADALSAAGIPAVAYHAGLDPALRSKRQEAFIRDDVRVVCATIAFGMGIDKSNV
RFVVHYDVPRSLEGYYQETGRAGRDGLPAECAWFFAYGDVARAERFVDEKPESERPAARA
QLERIVRYAYSNGCRRRELLGYFGEEYPLERCGACDNCLQPRASFDATVDAQKLLSCVYR
IREAHGYGVGIAHVVDVLVGAKTEKIERWYHDRLSTYGIGKDRDRRAWRHLADELMRLGL
LAQDAARHNVVTLTAAGRRALAERTAIEVREAVAAVAGGKARRAPAAVDEEYDREMFAVL
RALRREIAEERDVPPYVVFSDAVLRAMAREHPRTPAQLRAISGVGEKKLADFGARFLAAI
AESHVRD
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaggcggcgacgttgcgcgaggcgctcgagcgatggttcgggttcccgtcgttc
cgcccgtcgcaggaagcgatcgtccgcgacgtgctcgacggccgtgacgtcttcgcgctc
ttgccgaccggcggcggaaagtcgctctgctaccagctccccgcggtcctcaccgacggc
ctcaccgtcgtcgtctcgccgctgatcgcgctgatgaaagaccaagtcgacgcgctcgac
accgccgggatccccgcgacgtcgctcaactcgtcgctcgagtattccgacttgcggcgc
cgtctcgacggcctcgaacgcggcgcgtaccgtctcctctacgttgcgccggagcggctt
acgctgccggggttcgtcgacgatctcgaacggtgggggatcgcgcgcgttgtcgtcgac
gaagcgcactgcatcagcgagtggggccacgacttccgccccgagtaccgccgcatcgcg
ccgttgcgcgaccggtttcccgacgtgccgttctgcgcgttcaccgccaccgcgacggcg
cgcgtgcgcgacgacgtcgtcgcccagctcggcctgcgccgcccggccgtgcacgtcgcc
tcgttcgaccgccccaatctgacctatcgcgtgatgcatgggacgcgcgggatcgacgaa
ctcgtgcgctggctgcgcacgcgccctgacgacgacgccgggatcgtctacgccggcagc
cgtgcgaacaccgagaaactcgccgacgcgctcagcgccgccgggatcccggcggtcgcg
taccacgccgggctcgatccggcgctgcgctcgaaacgtcaggaggcgttcatccgcgac
gacgtgcgcgtcgtctgcgcgacgatcgcgttcgggatggggatcgacaaatcgaacgtg
cgcttcgtggtgcattacgacgtcccgcgcagcctcgaaggctactatcaggagaccggc
cgcgccggccgcgacggtctcccggccgagtgcgcgtggttcttcgcctacggcgacgtc
gcgcgcgccgaacgcttcgtcgacgagaagcccgagagcgaacgccccgcggcgcgcgcg
cagctcgagcgcatcgtccgctacgcgtactccaacggctgccgccggcgcgaactgctt
ggctacttcggtgaggagtatccactcgagcgctgcggcgcgtgcgacaattgcctgcag
ccgcgcgcgtcgttcgacgccaccgtcgacgcgcaaaaactgctctcgtgcgtctatcgc
atccgcgaagcgcacggctacggcgtcgggatcgcgcacgtcgtcgacgtgctggtcggc
gcgaagaccgaaaagatcgagcgctggtatcacgaccgcctctcgacgtacgggatcggg
aaagaccgcgaccggcgcgcgtggcgtcatctcgccgacgaattgatgcggctgggactg
ctggcgcaggacgccgcgcgccacaacgtcgtcacgctgaccgcggcgggacgccgcgcg
ctcgccgagcggacggcgatcgaggtgcgcgaggccgtcgccgcggtcgccggcggcaaa
gcgcgccgggcgccggccgcggtcgacgaggagtacgaccgggagatgttcgcggtgctt
cgcgcgctgcggcgcgagatcgccgaagaacgcgacgtgccgccgtacgtcgtcttcagc
gacgcggtgctgcgcgcgatggcgcgcgagcatccgcgcacgcccgcgcagcttcgcgcg
atcagcggcgtgggagagaagaagctcgcggacttcggcgcgcgcttcctcgccgcgatc
gctgagagccacgtgagagactaa
DBGET
integrated database retrieval system
