Vulcanimicrobium alpinum: WPS_23170
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Entry
WPS_23170 CDS
T09508
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vab
Vulcanimicrobium alpinum
Brite
KEGG Orthology (KO) [BR:
vab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vab03016
]
WPS_23170 (truB)
Enzymes [BR:
vab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
WPS_23170 (truB)
Transfer RNA biogenesis [BR:
vab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
WPS_23170 (truB)
Prokaryotic type
WPS_23170 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BDE07041
UniProt:
A0AAN1XYK3
LinkDB
All DBs
Position
complement(2265518..2266384)
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AA seq
288 aa
AA seq
DB search
MLGFVNLFKPAGPSSTQFGARLRRVYRDPAGKLAIGHVGTLDPQAAGVLPIALGRATRLI
PLITDRRKRYVCTLVLGRATTTGDATGETLVERDVPPDVDARLDAALPSFIGAVQQIPPM
FSAVKSGGRRLYDLARAGTTVERKPRTITIYAIAVLGRDANVVRLRIACSEGTYVRTLCE
DLAAACGTVGHMGALLREASGPFVLSEALTYDEVERDPGGALISPERVIPIPTVVLDARL
ATDFRAGRLVPLAEPPPDKHVFVRDSSRVLVGVGETVGALLAPRKVFV
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgctcggcttcgtcaacctgttcaagccggcgggaccgtcgtcgacgcagttcggcgcg
cgtctgcgtcgcgtctaccgcgatccggccgggaagctcgcgatcggacatgtgggcacg
ctcgatccgcaggcggcgggcgtccttccgatcgcgctcggcagggcgacgcgactgatc
cccctcatcaccgaccggcgcaagcggtacgtgtgcacgctggtgctcggacgtgcgacg
acgaccggcgatgcgaccggcgagacactcgtggaacgcgacgttccgccggacgtcgac
gcgcggctcgacgcggcgctgccgtcgttcatcggcgcggtgcagcagatcccgccgatg
ttcagcgccgtcaagagcggcggcaggcggctctacgatctcgcgcgcgccgggacgacg
gtcgaacgcaagccgcgcacgatcaccatctacgcgatcgccgtgctgggccgcgacgcg
aacgtcgtgcggctgcgcatcgcctgcagtgaagggacgtacgtgcgtacgctgtgcgag
gatctcgctgcggcgtgcgggaccgtcggtcacatgggcgcgctgctgcgcgaggcgtcg
gggccgttcgtgctctccgaggcgctcacgtacgacgaggtcgagcgcgaccccggcggc
gcgctgatctcgcccgagcgcgtcatcccgatcccgaccgtcgtcctcgacgcgcggctc
gcgacggattttcgcgccggccggctcgtcccgctcgccgaaccgccgcccgacaagcac
gtcttcgtgcgcgactcgtcgcgcgtgctcgtcggcgtcggggagaccgtcggcgcgctg
ctcgcgccgcgcaaggtcttcgtgtga
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