Vulcanimicrobium alpinum: WPS_23180
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Entry
WPS_23180 CDS
T09508
Name
(GenBank) phosphoesterase RecJ-like protein
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
vab
Vulcanimicrobium alpinum
Pathway
vab00920
Sulfur metabolism
vab01100
Metabolic pathways
vab01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vab00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
WPS_23180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vab03400
]
WPS_23180
Enzymes [BR:
vab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
WPS_23180
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
WPS_23180
DNA repair and recombination proteins [BR:
vab03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
WPS_23180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Pox_TAA1
Motif
Other DBs
NCBI-ProteinID:
BDE07042
LinkDB
All DBs
Position
complement(2266401..2267393)
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AA seq
330 aa
AA seq
DB search
MSSAETTVAESNTTDEVVAELRRRSSFVFVSHVKPDGDTLGAGLALGLALKQLGKRVAYF
QQDPVPRNLRFLPDSEDVTRDVAADLPADTLWVFCDMSDFTRAGEYLPAIPREHMLDIDH
HLGNSHFGAFNYVLPTEASTGTCVLRLLHALGVTITPEIATCILTTIMTDTGAFMHTNTT
PAVLRMSAEMIELGADKPLITDQIFANKRFAATKLLGMALERAVLDDDGRFCWTYVDEAM
LREANADGEDTEEIVQHLRAVDGVECAALFKDYEGAVRVSLRSRGRINVQAAAAMLGGGG
HFMASGLTYPERDLRKAVDGVHAALRAQGL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcgccgagacgaccgtcgcagagtcgaataccaccgacgaagtcgtcgcggag
ctgcggcgccgttcgtcgttcgtgttcgtttcgcacgtgaagccggacggcgatacgctc
ggcgcggggctcgcgttagggctcgcgctcaagcagctcggcaagcgcgtcgcgtatttt
cagcaggatcccgtcccgcgcaacctgcgttttctgccggactcggaggacgtgacgcga
gacgtcgcggcggatctgcccgcggatacgctgtgggtgttctgcgacatgagcgatttc
acgcgggccggcgagtatctcccggcgatcccgcgcgagcacatgctcgacatcgatcat
cacctcggcaactcgcacttcggcgcgttcaattacgtgctcccgaccgaggcttcgacg
gggacctgcgtcctgcggctgctgcacgcgctgggcgtgacgatcacgcccgagatcgcg
acctgcatcctcaccacgatcatgaccgataccggcgcgttcatgcacacgaacacgacg
cccgcggtgctgcggatgtcggcggagatgatcgaactcggtgccgacaagccgctgatc
accgatcagatcttcgcgaataagcgcttcgcggcgacgaaactgctcgggatggcgctc
gaacgcgcagtgctcgacgacgacggccggttttgctggacgtacgtcgacgaggcgatg
ctgcgcgaagcgaacgccgacggcgaagacaccgaagagatcgtccagcatctgcgcgcg
gtcgacggcgtcgaatgcgcggcgctgttcaaagactacgagggcgcggtgcgcgtgagc
ctgcgatcgcgcggccgcatcaacgtacaggccgcggcggcgatgctcggcggcggcggc
cacttcatggcgtccggcttgacctatcccgagcgggacctgcgcaaagcggtcgacggc
gtgcacgcggcgctgcgcgcgcaggggttgtag
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