Vulcanimicrobium alpinum: WPS_27570
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Entry
WPS_27570 CDS
T09508
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vab
Vulcanimicrobium alpinum
Pathway
vab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WPS_27570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vab03400
]
WPS_27570
Enzymes [BR:
vab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
WPS_27570
DNA repair and recombination proteins [BR:
vab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WPS_27570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BDE07481
UniProt:
A0AAN2CAU2
LinkDB
All DBs
Position
complement(2705877..2706314)
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AA seq
145 aa
AA seq
DB search
MLQYRSEDRQGHPFVGPAGNLLRDAMREAAIDPAHVYITNAVKHFKFVERGKRRIHASPK
RIKVRACEPRLVAEIEVVRPRLVVALGATAAQALLGPSFRVTAHRELVSAPHAERVVATV
HAARRVELSAFVDDLKIVARLMRDA
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
ttgctgcaataccgcagcgaagaccggcaaggccatcccttcgtcggtcccgccgggaac
ctgctgcgcgacgcgatgcgcgaggccgcgatcgatccggcgcacgtctacatcaccaac
gcggtcaagcattttaaattcgtcgagcgcgggaagcgacgcatccacgcgtcgccgaaa
cgcattaaagtgcgcgcgtgcgagccgaggctcgtcgccgagatcgaggtggtgcggccg
cggctcgtcgtcgcgctgggagcgactgcggcgcaggcattgctgggaccgtcgttccgc
gtcaccgcgcatcgcgaactcgtctccgcaccgcacgccgagcgcgtggtagcgaccgtc
catgccgctcgccgtgtcgagctttcggcgttcgtcgacgatttgaagatcgtcgcccgg
ctgatgcgggacgcctag
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