Vulcanimicrobium alpinum: WPS_28780
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Entry
WPS_28780 CDS
T09508
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vab
Vulcanimicrobium alpinum
Brite
KEGG Orthology (KO) [BR:
vab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vab03016
]
WPS_28780 (truA)
Enzymes [BR:
vab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
WPS_28780 (truA)
Transfer RNA biogenesis [BR:
vab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
WPS_28780 (truA)
Prokaryotic type
WPS_28780 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
BDE07602
UniProt:
A0AAN2CBC6
LinkDB
All DBs
Position
complement(2821210..2821983)
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AA seq
257 aa
AA seq
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MPTYRLVVEYDGSAFHGLQYQPALRTVAGALEDALARLFHQVVKISAAGRTDAGVHATGQ
VISFRAERAFPIERLRLALNACTPADLVVRDAALVADGFSARFDALERVYDYLIVNRPYP
SAIWRARAWIVPRALDDARLVQAAAPLVGEHDFVTFCGELPERGGTVREVFAIDAARSGD
LVRITVRGNAFLHRMVRIIVGTLVDVATGYRDLELTARALAARDRTAAGTTAPAHGLYLA
GVRYDAFDTYRPVALRP
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtgccgacgtatcgtctcgtcgtcgaatacgacgggtccgcgtttcacgggctgcagtac
cagcccgcgctgcgcaccgtcgccggcgcgctcgaagacgcgctcgcgcggctcttccat
caggtcgtgaagatcagcgccgccggccgcaccgatgccggcgtccacgcgaccgggcag
gtgatctcgttccgtgccgagcgcgcgtttccgatcgaacgcctgcgccttgcgctcaac
gcctgcacgcccgcggatctggtggtccgcgatgccgcgctcgtcgccgacgggttctcc
gcgcgtttcgacgcgctcgagcgcgtctacgactacctgatcgtcaaccgtccctatccg
tcggcgatctggcgcgcgcgcgcgtggatcgttccgcgtgcgctcgacgatgcgcgcctc
gtgcaggccgccgcgccgcttgtcggcgagcacgacttcgtgacgttctgcggcgagctt
cccgaacgcggcggcaccgtgcgcgaggtgtttgcaatcgacgccgcgcgatccggcgat
ctggtgcgcatcacggtgcgcggcaacgcgttcctgcaccggatggtgcgcatcatcgtc
gggacgctggtcgacgtcgcgaccggctatcgcgatctcgagctgacggcgcgcgcgctt
gcggcgcgtgaccgcaccgccgcggggacgacggcgcccgcgcacggactctatctcgcg
ggcgtccgctacgacgcgttcgacacgtaccggccggtcgcgctgcgtccctga
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