Vulcanimicrobium alpinum: WPS_29180
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Entry
WPS_29180 CDS
T09508
Symbol
dacB_2
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
vab
Vulcanimicrobium alpinum
Pathway
vab00550
Peptidoglycan biosynthesis
vab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
WPS_29180 (dacB_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vab01002
]
WPS_29180 (dacB_2)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vab01011
]
WPS_29180 (dacB_2)
Enzymes [BR:
vab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
WPS_29180 (dacB_2)
Peptidases and inhibitors [BR:
vab01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
WPS_29180 (dacB_2)
Peptidoglycan biosynthesis and degradation proteins [BR:
vab01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
WPS_29180 (dacB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Beta-lactamase
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
BDE07642
UniProt:
A0AAN1Y0C1
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All DBs
Position
complement(2863485..2865035)
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AA seq
516 aa
AA seq
DB search
MTPARALFIAGALIACAAPALAADRSAGANVPKPSSSGAPWSDGQISAVHTNVDLALARA
ASLQRAHIGMYAIDAHDGRVIYERNQDEAFQPASTFKLVVGNAALDKLGPAFHFTTQAYV
SDPVVDGALQGPLHLRGNGDVLLDDRVLASLPDALRTAGIASVRGVVPDPEPFPAYLPGW
SWDDFPWYYAAPVTALGFNDNAIGVTIAPGATVGAPAVVSVTPWGSACVAPGPCASEQGF
TIWNDATTSAAGGARTVDAELRRGEPLGNVHLIGAIPLGSTSENFSLAAPEPQRYAAAAA
ARALRAGGITVNAAPVAPAAVQASAPIAAIAAPQRVVWSHDSEPLSDLLFDLWLPSDNIL
AEELLRSVAATADKPYPGTAAGIAAEQGWLRGLGANLATITIEDGSGLSTYDRIAPRDLV
TILKHEWDSPQRDVVLDDLPIAGSRGTLKSEYTDPAIVGRVFAKSGSVSHVRCLAGYIAT
RTHGTVIFALQIDDWVGEFAELQRARERVLAEIAAL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcctgcgcgagccctcttcatcgcgggcgcgctcatcgcgtgcgccgcgcccgcg
cttgccgctgaccggtccgcgggcgcgaacgtcccgaagccctcatcttcgggcgcgccg
tggagcgacggccagatcagcgctgtgcataccaacgtcgatctcgcgctcgcgcgcgcg
gcgtcgctgcagcgcgcgcacatcgggatgtacgcgatcgacgcgcacgacggccgcgtg
atttatgagcgcaaccaggacgaggcgttccagccggcgtcgacgttcaagctcgttgtc
ggcaacgcggcgctcgacaagctcgggccggcgtttcacttcacgacgcaggcctacgtc
agcgatcccgtcgtcgacggtgcgctgcagggcccgctgcacttgcgcggcaacggcgac
gtgctgctcgacgatcgcgtgctcgcatcgctgccggatgctcttcgcaccgccggcatc
gcgtccgtgcgcggcgtcgtccccgaccccgaaccgtttcccgcgtatctcccgggctgg
tcgtgggacgacttcccgtggtactacgctgcgccggtcacggcgctcggcttcaacgac
aatgcgatcggcgtgacgatcgcacccggcgcgaccgtcggcgcgcccgcagtcgtctcg
gtgacgccatggggaagcgcgtgcgtcgctcccgggccgtgcgcaagcgaacagggtttc
acgatctggaacgatgcgactacgtcggccgcaggcggcgcacgcaccgtcgacgccgaa
ctccggcgcggtgagccgctcggcaacgtgcatctcatcggcgcgatcccgctcggcagc
acgagcgagaacttctcgctcgccgcgcccgaaccgcagcggtatgcagccgcggcggcg
gcgcgcgcgctgcgcgccggcgggattaccgtgaacgcggcgccggtcgctccggccgcg
gtgcaggcgagtgcaccgatcgccgcgatcgctgcgccgcagcgcgtcgtgtggtcgcac
gactcggaaccgctctccgatctgctgttcgacctgtggctgccgagcgacaacatcctc
gccgaagagctgctgcgttcggtcgcggcgaccgccgacaagccgtatcccggcaccgcc
gcggggatcgccgccgaacagggatggctacgcggtctcggcgcaaacctcgcgacgatc
acgatcgaagacggcagcggtctctcgacctacgaccgcatcgcgccgcgcgacctcgtc
acgatcctcaagcacgagtgggactcgccgcagcgcgacgtggtgctcgacgatctgccg
atcgcgggctcgcgcgggacgctcaagtccgagtataccgaccccgcgatcgtcggccgg
gtctttgcgaagagcggctcggtttcgcacgtgcgctgcttggcgggctacatcgccacg
cgcacgcacggcacggtgatcttcgcgctgcagatcgatgactgggtcggcgagttcgcg
gaactgcagcgcgcgcgcgagcgcgtgctggccgagatcgcggcgctctga
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