Vulcanimicrobium alpinum: WPS_29890
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Entry
WPS_29890 CDS
T09508
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
vab
Vulcanimicrobium alpinum
Pathway
vab02020
Two-component system
vab02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
vab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
WPS_29890 (sigB)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
WPS_29890 (sigB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vab03021
]
WPS_29890 (sigB)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vab02035
]
WPS_29890 (sigB)
Transcription machinery [BR:
vab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WPS_29890 (sigB)
Bacterial motility proteins [BR:
vab02035
]
Flagellar system
Flagellar assembly proteins
Stator
WPS_29890 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
tRNA_bind_2
DC_STAMP
Motif
Other DBs
NCBI-ProteinID:
BDE07713
UniProt:
A0AAN1XYH7
LinkDB
All DBs
Position
complement(2944907..2945578)
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AA seq
223 aa
AA seq
DB search
MNGDEREARIRELLPLVKQLARRVHRMIPTADLDDLIGDGSVGLIRAIDAFDPSFGVPPA
AYARKVVLGAILNGVRRMDRVPERTRRVLRTADAARFALAQQLGVLPTHHEMEARIPGLA
QARASALRATPLSLDASLPPGEHLEPDSAADPQLVYEVRGERARVRAAIGGLSARQRRVI
VAYYFQERSLRRLHAEMGISPQRVSQLHLSAMRRLRAVLGESA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgacgagcgcgaggcgcgcatccgcgaactgctccccctggtgaagcagctc
gcgcggcgcgtccaccggatgatccccaccgccgatctcgacgatctgatcggcgacggc
agcgtcgggctgatccgtgcgatcgacgcgttcgatccgtcgttcggcgtcccgccggcg
gcgtacgcgcgcaaggtggtactcggcgcgatcctcaacggcgtgcggcggatggatcgt
gtcccggaacggacgcgccgcgtgctgcgtacggccgatgcggcgcgcttcgcgctcgcg
cagcagctcggcgtgctgccgacgcatcacgagatggaagcgcgcatccccggtctcgcg
caggcacgcgcgagcgcgcttcgcgcgacgccgctctcgctcgacgcctcgctgccgccc
ggcgaacacctcgagcccgacagcgccgccgacccgcagctcgtctacgaagtgcgcggt
gagcgcgctcgcgtgcgcgccgcgatcggcgggctctcggcacgacagcgccgcgtcatc
gtcgcgtactattttcaggagcgctcgctgcgccgtttgcatgccgagatgggaatctcg
ccgcagcgcgtctcgcagcttcatctgagcgcgatgcgccgcttgcgcgccgtgctcggg
gaaagtgcatga
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