KEGG   Vulcanimicrobium alpinum: WPS_29890
Entry
WPS_29890         CDS       T09508                                 
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
vab  Vulcanimicrobium alpinum
Pathway
vab02020  Two-component system
vab02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:vab00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    WPS_29890 (sigB)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    WPS_29890 (sigB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vab03021]
    WPS_29890 (sigB)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:vab02035]
    WPS_29890 (sigB)
Transcription machinery [BR:vab03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     WPS_29890 (sigB)
Bacterial motility proteins [BR:vab02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    WPS_29890 (sigB)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 tRNA_bind_2 DC_STAMP
Other DBs
NCBI-ProteinID: BDE07713
UniProt: A0AAN1XYH7
LinkDB
Position
complement(2944907..2945578)
AA seq 223 aa
MNGDEREARIRELLPLVKQLARRVHRMIPTADLDDLIGDGSVGLIRAIDAFDPSFGVPPA
AYARKVVLGAILNGVRRMDRVPERTRRVLRTADAARFALAQQLGVLPTHHEMEARIPGLA
QARASALRATPLSLDASLPPGEHLEPDSAADPQLVYEVRGERARVRAAIGGLSARQRRVI
VAYYFQERSLRRLHAEMGISPQRVSQLHLSAMRRLRAVLGESA
NT seq 672 nt   +upstreamnt  +downstreamnt
atgaacggcgacgagcgcgaggcgcgcatccgcgaactgctccccctggtgaagcagctc
gcgcggcgcgtccaccggatgatccccaccgccgatctcgacgatctgatcggcgacggc
agcgtcgggctgatccgtgcgatcgacgcgttcgatccgtcgttcggcgtcccgccggcg
gcgtacgcgcgcaaggtggtactcggcgcgatcctcaacggcgtgcggcggatggatcgt
gtcccggaacggacgcgccgcgtgctgcgtacggccgatgcggcgcgcttcgcgctcgcg
cagcagctcggcgtgctgccgacgcatcacgagatggaagcgcgcatccccggtctcgcg
caggcacgcgcgagcgcgcttcgcgcgacgccgctctcgctcgacgcctcgctgccgccc
ggcgaacacctcgagcccgacagcgccgccgacccgcagctcgtctacgaagtgcgcggt
gagcgcgctcgcgtgcgcgccgcgatcggcgggctctcggcacgacagcgccgcgtcatc
gtcgcgtactattttcaggagcgctcgctgcgccgtttgcatgccgagatgggaatctcg
ccgcagcgcgtctcgcagcttcatctgagcgcgatgcgccgcttgcgcgccgtgctcggg
gaaagtgcatga

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