Vulcanimicrobium alpinum: WPS_32020
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Entry
WPS_32020 CDS
T09508
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
vab
Vulcanimicrobium alpinum
Pathway
vab00470
D-Amino acid metabolism
vab00550
Peptidoglycan biosynthesis
vab01100
Metabolic pathways
vab01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vab00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
WPS_32020 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
WPS_32020 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
WPS_32020 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vab01011
]
WPS_32020 (ddl)
Enzymes [BR:
vab01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
WPS_32020 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
vab01011
]
Precursor biosynthesis
Amino acid ligase
WPS_32020 (ddl)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
ATPgrasp_ST
ATP-grasp
GARS_A
RimK
CPSase_L_D2
TTL
Motif
Other DBs
NCBI-ProteinID:
BDE07926
UniProt:
A0AAN1XZW3
LinkDB
All DBs
Position
complement(3156379..3157302)
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AA seq
307 aa
AA seq
DB search
MKVAVVMGGPSAEREVSIQSGTGVMRALAALGHDARSLDFDGRFVEAIREIAPDVVFNAL
HGPGGEDGTIQGILEWMGIPFTGSGIAACAVAMDKHLTKKLLAAEGLPTPAWDVFDLTGG
TLPLLPGSLNLPLVVKPRASGSSAGVVIVKSHEAWSKAVLAASTRTPEVLAEEFVPGREF
SCGVLGEEALPVVEIVPSDEFYSYDAKYKPGGSRHLIPAPIDHDLTSRLQTLALSVHRLL
GLRDYSRTDFIVTKEGRPTILEINALPGMTPTSLLPEEALSAGISYEALVERLVQHALAR
ATELQVG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggtcgccgtggtgatgggtggtccgagcgcggaacgcgaggtgtcgatccaaagc
ggcaccggcgtgatgcgcgcgctcgccgcgctcggccacgatgcacgttcgctcgacttc
gacggccgcttcgtcgaagcgattcgcgagatcgcgccggacgtcgtcttcaacgcgctg
cacggaccgggcggcgaagacggcacgatccaagggatcctcgagtggatggggattccg
ttcaccggcagcgggatcgccgcgtgcgcggtcgcgatggacaagcacctcacgaagaag
ctgctcgccgccgagggcctgccgacgcccgcctgggacgtcttcgatctcaccggcggg
acgctgccgctgctgccgggttcgctgaatctgccgttggtggtgaaaccgcgcgcgagc
ggttcgagtgcgggcgtggtgatcgtgaagtcgcacgaagcgtggtcgaaggcggtgctc
gccgcatcgacgcgcacgcccgaggtgctggccgaggagttcgtgccggggcgcgagttc
tcgtgcggcgtgctcggtgaagaagcgctgccggtcgtcgagatcgtgcctagcgacgag
ttctattcgtacgacgcgaagtacaagccgggcggctcgcgccatctcatcccggcgccg
atcgatcacgatctcacctcgcgtctgcagacgctcgcgctctcggtgcatcgcctgctg
ggcctgcgcgattactcgcgcaccgacttcatcgtcaccaaagaagggcgtccgacgatc
ctcgagatcaacgcgctccccgggatgacgccgaccagcctcctccccgaagaagcgttg
agcgccggcatctcctacgaagcgctggtggaacgcctcgtgcagcacgccctcgcccgc
gcaaccgaactgcaagtcggctga
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