Vulcanimicrobium alpinum: WPS_32720
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Entry
WPS_32720 CDS
T09508
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
vab
Vulcanimicrobium alpinum
Pathway
vab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WPS_32720 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vab03400
]
WPS_32720 (mutM)
Enzymes [BR:
vab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
WPS_32720 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
WPS_32720 (mutM)
DNA repair and recombination proteins [BR:
vab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WPS_32720 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_IS1595
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
BDE07996
UniProt:
A0AAN1XZ16
LinkDB
All DBs
Position
complement(3217090..3217905)
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AA seq
271 aa
AA seq
DB search
MPELPEVETIARGLANAVTGKTIDAVAISMAKIAVAAPGVDFAAALAGETIGAVGRRGKY
VVIALGSGRRLAVHLRMTGRLIVHGAEYPEPYPYTHIVLRFTDGTRLSFADVRQFGRMRL
LEAGDPWDADGGLEPLSEGFTSEAFVSMLDGRRTPIKAFLLDQSRIAGVGNIYACEALWE
AGIRPSRPSHKISRPARRRLHGAVRSVLQRAIDARGTSVDDYVDAEGLKGGFQNQLAVYG
RLGEPCPRCGKPIVRTVIGQRGTWWCRSCQK
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactccctgaagtcgagacgatcgcgcgcggcctcgccaacgccgtcaccggc
aagaccatcgacgcggtcgcgatctcgatggcgaagatcgcggtcgcggcgcccggcgtc
gacttcgccgcggcgctcgccggcgagacgatcggggcggtggggcgacgcggcaagtac
gtcgtgatcgccttgggttcgggccgccggctggcggtgcacctgcggatgaccggccgc
ctgatcgtccacggcgcggagtaccccgagccctatccctacacccacatcgtcctccga
ttcaccgacggaacgcggctcagcttcgccgacgtgcgccaattcggccggatgcggctg
ttggaagcaggcgacccctgggatgcggacggcggtctggaaccgctttccgaggggttt
accagcgaggcgtttgtgagtatgctggacgggcgtcgcacgccgatcaaggcgttcttg
ctcgatcagagccggatcgccggcgtcggaaacatctatgcgtgcgaagccttgtgggaa
gcggggatccggccgagccgcccgtcacacaagatcagcaggccggctcgccgccggctg
cacggcgcagttcgaagcgttctccagcgtgcgatcgacgcccgcgggacgagcgtggac
gattacgtcgacgctgaggggctgaagggcgggttccaaaaccaactcgccgtttacggc
cgcctcggcgaaccgtgtcctcgctgcggcaaacccatcgtccgcacggtgatcggacag
cgcggcacctggtggtgccggagctgtcaaaaataa
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