Vulcanimicrobium alpinum: WPS_33280
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Entry
WPS_33280 CDS
T09508
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
vab
Vulcanimicrobium alpinum
Pathway
vab00250
Alanine, aspartate and glutamate metabolism
vab00310
Lysine degradation
vab00350
Tyrosine metabolism
vab00650
Butanoate metabolism
vab00760
Nicotinate and nicotinamide metabolism
vab01100
Metabolic pathways
vab01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
WPS_33280 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
WPS_33280 (gabD)
00310 Lysine degradation
WPS_33280 (gabD)
00350 Tyrosine metabolism
WPS_33280 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
WPS_33280 (gabD)
Enzymes [BR:
vab01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
WPS_33280 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
WPS_33280 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
WPS_33280 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
BDE08052
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Position
3270648..3272117
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AA seq
489 aa
AA seq
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MTSVLERSTLLKSQAFVGGAWVDADDGATFPVYDPATGERIADVPRFGANETRRAIEAAN
AALPAWRAKTGKERAALVRRWYELIVEHTEELAHIMTLEQGKPLAEARGEIAMGAGYVEW
NAEEAKRIYGDTIPTLANDRRMVVVKQPIGVCVGITPWNFPHAMVTRKASPAIAAGCTFV
LKPAEQTPLSALAVAALAEMAGLPAGVFNVVTGDATDAPVIGEEMTSNPIVRKLGFTGST
AVGKLLMAQCARTVKKVSLELGGNAPFIVFDDADVDAAVNGAMAAKFRNAGQVCVSPNRL
FVQSGIHDAFVQRLAERVRTLRTGNGFEDGVQIGPLIEDQGFAKVVEHVDDACAHGARLV
TGGASKLGGTFFEPTVLTNVNATMRLSHEETFGPVAAIASFKTEAEVIATANDTPYGLAS
YFYSRDIGRVWRVAEALETGMVGINTPMLANEAIPFGGVKESGIGREGSKYGIEEWTEIK
YLCFGGLDT
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgtgctggaacgctcgacgctcttgaagtcgcaggccttcgtcggcggcgcg
tgggtcgacgcggacgacggtgcgacattcccggtctacgatccggcgaccggcgagcgg
atcgccgacgttccgcgcttcggcgcgaacgagacgcggcgggcgatcgaggccgcgaac
gccgcgctcccggcgtggcgcgcgaaaaccgggaaggagcgcgccgcgctcgtgcggcgc
tggtacgaactgatcgtcgagcacaccgaagagctcgcgcacatcatgaccctcgaacag
gggaagccgctcgcggaagcgcgcggcgagatcgcgatgggcgccggctacgtcgagtgg
aacgccgaagaagcgaagcggatctacggcgacacgatcccgacgctcgcgaacgaccgc
cgcatggtcgtcgtgaaacagccgatcggcgtgtgcgtggggatcacgccgtggaatttt
ccgcacgcgatggtgacgcgcaaggcgtcgccggcgatcgccgcaggctgcacgttcgtg
ctcaaaccggcggagcagacgccgctctccgcgctcgcggtcgccgcgctcgccgagatg
gccggcttaccggcgggcgtcttcaacgtcgtcaccggcgacgcgaccgacgcgccggtg
atcggcgaggagatgacgtcgaacccgatcgtgcgcaaactcggcttcaccggctcgacc
gcggtcggcaagctgctcatggcgcagtgcgcgcgcacggtcaagaaggtctcactcgaa
ctcggcggcaacgcgccgttcatcgtgttcgacgacgccgacgtcgatgccgcggtcaac
ggcgcgatggcggcgaagttccgcaacgccggacaagtttgcgtgagtcccaaccgcctt
ttcgtgcagagcgggatccacgatgcgttcgtccagcgtctcgcggaacgcgtgcgcacg
ctgcggaccggcaacgggttcgaagacggcgtgcagatcgggccgttgatcgaggatcag
ggcttcgccaaggtcgtcgagcacgtcgacgatgcgtgcgcgcacggtgcccggctggtg
accggcggcgcgagcaaactcggcgggacgttcttcgagccgacggtattgaccaatgtg
aacgcgacgatgcggctcagtcacgaagagacgttcgggccggtcgcggcgatcgcgtcg
ttcaagaccgaagccgaggtgatcgcgacggcgaacgacacgccgtacggcctcgcgtcg
tatttttacagccgcgacatcggccgcgtgtggcgggtcgccgaagcgctcgaaaccgga
atggtcgggatcaacacgccgatgcttgccaacgaagcgatcccgttcggcggcgttaag
gaatccgggatcggccgcgaaggctccaaatacgggatcgaggagtggaccgagatcaag
tacctctgcttcggaggcctcgacacataa
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