Vulcanimicrobium alpinum: WPS_34140
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Entry
WPS_34140 CDS
T09508
Name
(GenBank) hypothetical protein
KO
K03090
RNA polymerase sigma-B factor
Organism
vab
Vulcanimicrobium alpinum
Brite
KEGG Orthology (KO) [BR:
vab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vab03021
]
WPS_34140
Transcription machinery [BR:
vab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WPS_34140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR
HTH_11
GerE
Sigma70_ECF
HTH_24
HTH_38
DUF603
HTH_3
HTH_37
Motif
Other DBs
NCBI-ProteinID:
BDE08138
UniProt:
A0AAN1Y0I8
LinkDB
All DBs
Position
complement(3363134..3363961)
Genome browser
AA seq
275 aa
AA seq
DB search
MSSSAPHVDEERWDRNRARAAFARFAEVRADRSLDSGPDNAGVSEYDRLRNDLVVAHLNL
VRYLAVKFANRGEALDDLIQVGTVGLLKAIDRFDLDRGVEFTTYATPTIVGEIKRYFRDK
GWAVKVPRRLQELNLAVNRALEKLTVKLGHSLTVAELASHLGASEEDILEAQELGQAYNL
LSLDTELNGEGDKKSQTLADYVGQNDAGLELLEDRANLERAFQVLTGRERVILYLRFYES
VSQTEIAKRLNVSQMHVSRLQQKALEKLKNFLQEK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcagccccccatgtcgacgaggaacggtgggaccgtaatcgcgcgcgcgca
gcgttcgcgcggttcgccgaagtgcgcgcggaccgttcgctcgacagcggtcccgacaac
gccggcgtcagcgaatacgaccgcttgcgcaacgacctcgtcgtcgcgcacctcaacctg
gtgcggtatctcgcggtcaaatttgccaaccgcggcgaagcgctcgacgatctgatccaa
gtcggcacagtcggactcctcaaagcgatcgaccgcttcgatctcgaccgcggggtcgaa
ttcaccacctacgcgacgccgacgatcgtcggcgagatcaagcgctacttccgcgacaag
ggctgggccgtcaaggtcccgcgccgcctgcaggagctcaacctcgcggtcaaccgcgcg
ctcgagaagctcacggtgaagctcggccactcgctgaccgtcgcggaactggcgtcgcat
ctcggcgccagcgaagaagacatcctcgaagcgcaggagctcggccaggcgtacaacctg
ctctcgctcgacaccgaactcaacggcgaaggcgacaagaaatctcagacgctggccgac
tacgtcggacagaacgacgccggtctcgaactgctcgaggaccgcgccaacctcgaacgc
gctttccaagtgctcaccggccgcgagcgcgtgatcctctacctgcgcttctacgagtcg
gtctcccagaccgagatcgcgaagcgcctcaacgtctcgcagatgcacgtctcgcgcctc
cagcagaaggcgctcgagaaactgaagaacttcctccaggagaagtag
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