Vulcanimicrobium alpinum: WPS_34500
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Entry
WPS_34500 CDS
T09508
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vab
Vulcanimicrobium alpinum
Pathway
vab00260
Glycine, serine and threonine metabolism
vab00460
Cyanoamino acid metabolism
vab00630
Glyoxylate and dicarboxylate metabolism
vab00670
One carbon pool by folate
vab00680
Methane metabolism
vab01100
Metabolic pathways
vab01110
Biosynthesis of secondary metabolites
vab01120
Microbial metabolism in diverse environments
vab01200
Carbon metabolism
vab01230
Biosynthesis of amino acids
vab01240
Biosynthesis of cofactors
vab04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
vab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
WPS_34500 (glyA)
09102 Energy metabolism
00680 Methane metabolism
WPS_34500 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
WPS_34500 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
WPS_34500 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
WPS_34500 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
WPS_34500 (glyA)
Enzymes [BR:
vab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
WPS_34500 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BDE08174
UniProt:
A0AAN2CB91
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Position
complement(3394900..3396147)
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AA seq
415 aa
AA seq
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MQLLQPETLAVQDPELWASIENEERRQRDNLELIASENYASRAVREATASVMTNKYAEGY
PGKRYYGGCEFVDVAETLAIERLKKLFGAAHANVQPHAGAQANMAAMMAVLQPGDTILGM
SLAHGGHLTHGTKVSSSGKLYNALAYGVRKDTELIDYDQVRELAREHKPKLIIAGASAYP
RTMDYAPFREIADEIGALFLVDMAHIAGLVAAGLHPSPVPFAQFVTSTTHKTLRGPRGGI
ILSTAEYAQAVDKSVFPGIQGGPFMHIIAAKAVAFGEALQPSFRTYQQQVLDNARAMGEE
LLRAGVRLVGGGTDTHLLLVDLTPKNLTGKAVEHYLDEIRITVNKNAIPFDPQKPAVTSG
IRIGSPAITSRGFGEAEAREVGKIIGEALTDIETGAKKDALRARVAELTERHDVP
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgctgcagcccgagacgctcgccgttcaggatcccgaactctgggcgtcgatc
gagaacgaagagcgccgccagcgcgacaacctcgagttgatcgcgtcggagaactacgcc
agccgcgcggtgcgcgaagcgacggcgtccgtgatgaccaacaagtacgcggagggctat
cccggcaaacggtactatggcggctgcgaattcgtcgacgtcgccgagacgctcgcgatc
gaacggctgaaaaagctgtttggcgccgcgcacgccaacgtccagccgcacgccggcgcg
caggccaacatggccgcgatgatggcggtgctgcagcccggcgacacgatcctggggatg
tcgctcgcgcacggcggccacctcacgcacggcacgaaggtctcgtccagcggcaagctc
tacaacgcgctcgcctacggcgtgcgcaaggacaccgagctgatcgattacgatcaggtg
cgcgagctcgcgcgcgagcacaagccgaagctgatcatcgccggcgcgagcgcgtatccg
cgcacgatggactacgcgccgttccgcgagatcgccgacgagatcggcgcgctgtttctg
gtcgacatggcccatatcgcgggcctggtcgccgccggtctccatccgtcgccggtcccg
ttcgcgcagttcgtcacctcgacgacgcacaagacgctgcgcgggccgcgcggcgggatc
atcctcagcactgcggagtacgcgcaggccgtcgacaagagcgtctttcccggaattcag
ggcggaccgttcatgcacatcatcgcggcgaaggcggtcgcgttcggcgaagcgctccag
ccgtcgttccgcacctaccagcagcaggtgctcgacaacgcgcgcgcgatgggcgaggaa
ctcctgcgcgccggcgtgcggctcgtcggcggcggaaccgatacgcatttgctgctcgtc
gatctcacgccgaagaacctcaccggcaaagccgtcgagcactacctcgacgagatccgc
atcaccgtcaacaagaacgcgatcccgttcgatccgcaaaagcccgcagtcacgagcggg
atccgcatcgggtcacccgcgatcacctcgcggggcttcggtgaagcggaggcgcgcgaa
gtcggcaagatcatcggcgaagcgctcaccgacatcgagaccggcgcgaagaaggacgcg
ctgcgcgcgcgcgtcgcggagttgaccgaacgccacgacgtcccgtag
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