Vulcanimicrobium alpinum: WPS_34920
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Entry
WPS_34920 CDS
T09508
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vab
Vulcanimicrobium alpinum
Pathway
vab00300
Lysine biosynthesis
vab00470
D-Amino acid metabolism
vab01100
Metabolic pathways
vab01110
Biosynthesis of secondary metabolites
vab01120
Microbial metabolism in diverse environments
vab01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
vab00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
WPS_34920 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
WPS_34920 (lysA)
Enzymes [BR:
vab01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
WPS_34920 (lysA)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BDE08216
UniProt:
A0AAN2CBG0
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All DBs
Position
3436125..3437366
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AA seq
413 aa
AA seq
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MTTTSFAVDAALGGVPARELAATYGTPLFVIDLDVFDLEVDRVVRSCAPHGITVGYAAKA
FLCAALAEHLAATPLRLDVCSLGELVTAERGGFPAERMYFHGCGKTAEELQAIVDRRVAF
DVIDNDEELARLAAITSPADPVDVMLRINTGIEAHTHAFIRTGGENTKFGFALAAAPAAF
ARIAALPQLRLIGLHGHIGSQIAETAPFVANLDELLGLARIARASGHPVAEIICGGGIGV
EEGPDDPRPVDIDELTAALEGRARGTGLRLAVEPGRAVIARAGSSLYRVMAVKTQGRRRF
VIVDGGMADNPRPLLYGARHLPEVVAARAAGPDEPATLAGRSCENDEMGDYVLPRDLAAG
DLIALRITGAYTYSMASNYNRFGRPAVVFVRDGHHRRVIRAETADDVMRLDVV
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaccagctttgcggtcgatgcggcgctgggcggcgtccccgcgcgcgaactc
gccgcgacgtacggcacgccgctgttcgtgatcgacctcgacgtcttcgacctcgaagtc
gaccgcgtcgtgcggtcgtgcgcgccgcacggcatcacggtcggttacgcggcgaaagca
tttctgtgcgccgccctcgccgaacacctcgcggcgacgcccttacgcctggacgtctgt
tcgctcggggagctggtgaccgccgagcgcggcggcttccccgccgaacgcatgtatttt
cacggctgcgggaagaccgcggaggagctgcaggcgatcgtcgatcgtcgcgtcgcgttc
gacgtgatcgacaacgacgaagaactcgctcggctcgcggcgatcacgtcgcccgccgac
ccggtcgacgtcatgctgcggatcaacaccgggatcgaagcgcacacccacgcctttatc
cgcaccggcggcgagaacacgaaattcggttttgcgctggcggctgcgccggcggcgttc
gcgcggatcgccgccctcccgcaactgcggctgatcggcctgcacggccacatcggctcg
caaatcgccgagaccgcgccgttcgtcgccaatctcgacgaactgctcggcctcgcgcgg
atcgcgcgcgcgagcggccacccggtcgctgagatcatctgcgggggcgggatcggcgtc
gaggaaggccccgacgatccgcgtccggtcgacatcgacgaactgaccgcggcgctcgag
ggtcgcgcgcgagggaccggcctgcggctcgcggtggagcccggccgggccgtgatcgcg
cgcgcgggctcgtcgctgtaccgcgtcatggccgtgaaaacgcaggggcggcggcgcttc
gtcatcgtcgacggcgggatggccgacaacccgcgcccgctcctctacggcgcgcggcat
ctccccgaggtcgtcgcggcgcgcgcagcaggccccgacgaaccggcgacgctggccggt
cggtcgtgcgaaaacgacgagatgggagactacgtgctgccgcgcgatctcgccgccggc
gacctcatcgcgctgcgcatcaccggcgcctatacgtacagcatggcgagcaactacaac
cgcttcggccggcccgccgtcgtgttcgtgcgcgacggtcatcatcgccgcgtgatccgt
gccgagaccgccgacgacgtgatgcggctggacgtcgtgtga
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