Vagococcus xieshaowenii: E4Z98_01590
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Entry
E4Z98_01590 CDS
T05932
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
vac
Vagococcus xieshaowenii
Pathway
vac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E4Z98_01590 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vac03019
]
E4Z98_01590 (rny)
Messenger RNA biogenesis [BR:
vac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E4Z98_01590 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
QCA28065
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All DBs
Position
316947..318512
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AA seq
521 aa
AA seq
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MNSLILIIVLGIIALIVGLLIGSIIAKNNHQKAIQNASVTAESILENAKRQAETLKKETL
IEAKEENQKYRLEIESELKQSRSEVKEQENRLLQREANIDRKDQALVQRENSLAEKEQKL
DSKTQLIGEREQEVQELINQKALELEKVASLSKNEAKDIIMTQTQEELEHELAVRVKENE
RKVKEDSDRIAKNMLSLAMQRCAADQVSESTVSVVTLPNDEMKGRIIGREGRNIRTLETL
TGIDLIIDDTPEAVVLSGFDPIRREIARMALEKLIQDGRIHPARIEEMVDKARKEMDERI
REYGENAAFEVGIHTLHPDLIKIMGRMRFRTSYGQNVLNHSIEVAKLTGVLAGELGEDVE
MAKRAGFLHDIGKAIDREVEGSHVEVGVELAKKYKEPEIVINAIASHHGDTEATSVIAVL
VAAADALSAARPGARSESLENYIKRLERLEGIANEFEGVDYSFAVQAGREVRIMVKPDQI
SDDQATLLVREIRKRIEDELEYPGHIKVTVVRETRAVDYAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaattcacttattttaatcattgttctcggtatcatcgcgttaattgttggtctactt
atcggttcgattattgcaaagaacaatcatcaaaaagcaattcaaaatgccagtgtgacg
gcagagagtattttagaaaatgctaaacgtcaagctgaaactttgaagaaagaaacgtta
atcgaggctaaagaagagaatcaaaagtatcgtttagaaattgaaagtgagttgaaacaa
agccgaagcgaagttaaagaacaagaaaaccgtttgttacaacgtgaagctaacattgat
cgtaaggatcaggcgttagttcaacgtgaaaattcactggcagaaaaagaacagaaacta
gattcgaaaacacaattgataggtgaacgagagcaagaagttcaggagttaattaaccaa
aaagcgttagagcttgaaaaagttgcctcattaagcaaaaatgaagcaaaagatattatt
atgacgcaaacacaagaagaattagaacatgaattagctgttagagttaaagaaaatgag
cgtaaagttaaagaagactcagatcgtattgcaaagaatatgctgtctttagcaatgcaa
cgatgtgctgctgaccaagtatcagaatcaacggtgtcagttgtaacgttacctaatgat
gagatgaaaggtcgtattattggacgagaaggccgaaacattcgtaccttagaaacatta
acaggaattgatttgattattgatgacacgccagaagcagtagttttatcaggatttgat
ccaattcgtcgtgaaattgcacgtatggcacttgaaaaattaattcaagatggacgtatt
cacccagctagaatcgaagaaatggtcgataaagcgcgtaaagaaatggatgaacgtatt
cgagaatatggtgaaaatgcagcatttgaagtaggtatccatacattgcatcctgattta
attaaaatcatgggacgtatgcgttttagaacaagttatggtcaaaatgtattaaaccat
tcaattgaagtagctaaattaacgggtgtattagctggtgaattaggtgaagatgttgaa
atggctaaacgtgcaggcttcttacatgatattgggaaagccattgaccgtgaagtagaa
ggctcacatgttgaagttggagtagaacttgctaagaaatacaaagagcctgaaattgta
attaatgcgattgcctctcatcatggtgacacagaagcaacatcagttattgcagtatta
gttgcagcagcagatgctttatcagctgctcgtccgggtgctcgtagcgaatcattagag
aattacatcaaacgtttagaacgtttagaaggtatcgctaatgaatttgaaggagttgat
tacagctttgctgttcaagcaggtcgtgaagtgagaatcatggttaaaccagatcaaatt
tcagacgatcaagcaacattattagttcgtgaaattcgtaaacgtattgaagatgaactg
gaatatccgggtcatatcaaagtaacggttgtacgtgaaacccgagcagtcgattacgct
aaataa
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