Vagococcus xieshaowenii: E4Z98_03305
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Entry
E4Z98_03305 CDS
T05932
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
vac
Vagococcus xieshaowenii
Pathway
vac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E4Z98_03305 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vac03400
]
E4Z98_03305 (mutM)
Enzymes [BR:
vac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
E4Z98_03305 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E4Z98_03305 (mutM)
DNA repair and recombination proteins [BR:
vac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E4Z98_03305 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
DUF2688
zf-dskA_traR
DZR
Zn_ribbon_Nudix
Cas12f1-like_TNB
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
QCA28383
LinkDB
All DBs
Position
671000..671830
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVEAVRTGLELLVIGKQVEEVVVLWPSIIESPEVDVFKSELVGQTIEEMRRRGKF
LIFKWTNYDMISHLRMEGKYEVHQQTDAIDKHTHVIFKFTDGTELRYLDVRKFGRMTLLP
KDTALNYKGITKLGPEPTPETFTLEPFKTSLKKYHKAIKPLLLDQKLVTGLGNIYVDEAL
FEAQIHPEQPADSLTTKEVTRLYQSIIDVLARAVEAGGTTIRSYKNALGEAGKFQVSLNA
YGLTGEPCKRCGTPIVKTKVAQRGTHFCPNCQKIHR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagtagaagccgttagaacaggattagaattacttgttattggt
aaacaagtagaagaagtggtcgtattatggccaagtattattgaatcaccagaagtggat
gtttttaaaagtgaactagttggtcagacgattgaagagatgagacgccgtgggaagttt
ttaatttttaagtggacgaattatgacatgatttctcatctacgaatggaagggaaatat
gaagttcatcaacaaacagatgccattgataaacatactcatgtcatctttaaatttact
gatggcacggaattacgttatttagatgttcgtaagtttggcagaatgacattactgcct
aaagataccgcgctaaattataaaggaattactaaattagggccagaaccaacacctgaa
acatttacgttagagccttttaagacaagtttaaaaaaatatcataaagccattaagcct
ctattattggatcaaaaattagtaactggattaggcaatatttatgtagatgaagcctta
tttgaagctcagattcaccctgaacagccagcagatagcttgacgacaaaagaagtaaca
cgtttgtatcaaagtattattgatgtgttagctagagctgtagaagcaggaggaacgacc
attaggagttataaaaatgcgttaggcgaggcaggtaaatttcaagtgtctctcaatgcc
tatggtcttacaggggagccttgtaaacgttgtggtacaccgattgttaaaaccaaagtt
gctcaaagagggacacatttttgtccaaattgtcaaaaaattcatcgttag
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