Vagococcus xieshaowenii: E4Z98_04075
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Entry
E4Z98_04075 CDS
T05932
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
vac
Vagococcus xieshaowenii
Brite
KEGG Orthology (KO) [BR:
vac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vac03400
]
E4Z98_04075 (addA)
Enzymes [BR:
vac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E4Z98_04075 (addA)
DNA repair and recombination proteins [BR:
vac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
E4Z98_04075 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
AAA_16
AAA_12
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QCA28529
LinkDB
All DBs
Position
833661..837449
Genome browser
AA seq
1262 aa
AA seq
DB search
MTQSHLPTRPPESHFTVGQWQSIYDGGSNLLVSASAGSGKTTVLVQRVIEKIKAGLNIDE
LLIVTYTEAAAKEMKERLIGAVQKAINDENNSIELQQHLLNQLSKIPTAPVSTLHAFCLK
VIRKYYYLLEIDPVFRLLTDETEVMLLKEEVWETLRETLYEQEAEWFYPLTENFSGDRND
EGLTRMIFSMYEFSRANPNPDQWLDHLEILYETTDNLGDLPIYQSYLKPVIIKELTEALN
RGREAVASIEGEPQLEKPLAILREETLWIEQLYELFLANQLEDVYHLLQGIKYKTYSGPR
GKEVDPLIKEAFEGTKAYRNQNKEWVVNLTKGLFATDPKEQLQILAKSQLYVHHLAQITK
QFAKKYKQRKEEKNTLDFNDLEHLTLQILTTSEDSKPTASVASQYYREQFKEVLVDEYQD
INQLQETILFWLRSDNDEAGNFFMVGDVKQSIYSFRLADPTLFIKKYTDYATEKGGRRII
LAENFRSRGDVLSFTNFIFRQIMNESVGQLAYDEEARLIHGFTGFPEADNYQTEILIYEN
GASKDEENAFEEGEKEELDEADDFTIDDKTEGEVRLIGQKIHELKTNGFQVYNKKEKKMR
PLEFRDIVILTPTKKNNLVLLDLFKELGIPLHVNDTQNYFQATEVKIMLALLTIIDNPHQ
DIPLASVLRSPVVGLKENDLALIRTTVPSGDYYHAVQTIVRDDTLRIDQTLREQLIRFEE
YLVKWRESARRVKLVDLIWMVYQDTGLLNYVAGLPSGKQRQANLHALYDRAMKYEHSSFK
GLFQFIRFIEKMQQKDKDLAEPNAVGEEEDAVRVMTIHASKGLEFPVVFIMDLNRQFNMM
DLRNRYVFDEKLGIGVKYLDNMTRLESVTLPYHVISQEKRKKLLAEEMRKLYVGLTRAEE
KLFLVGSYESKEKAWKKWTMSADNSQETINDTLRLQAKSLFDWIGMSLVRHESMKEDVAS
LVDDVQTLFTENDTTFSLSFYQMKDLVGLNDERVVAEEITDIPEVKTDTALVTQAIERLG
YRYTFDAAVKTASYQSVSEIKRVFTDPDDKQLLPLDYINTMTAGANRYVQSEFAKPSFIQ
SAKQVSYAQIGTATHLVLQSIDLKNDITERSIEDVIETLLNNQAIEPEVAKRINRKQLLA
FFTTPFGQFIRQHAEQTYREQPFSMLLPAKEIYEGFPLDNEDRVLIHGIIDGYIETETEL
ILFDFKTDYVDVKNKQAAIEKIKKNYKGQLHLYKQALEAEKKRPVTAVQLVLLATQDIIE
LD
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgacccaatctcatttaccgacaagaccaccggaaagtcatttcacggtaggccagtgg
cagtctatctatgatggtggtagtaacttattagtatctgcctcagcaggttcaggtaaa
acaaccgttcttgtacaacgagtaattgaaaaaatcaaagcaggtttaaacattgatgaa
ctattaatcgtgacttatacggaagctgcagcgaaagaaatgaaagaacgactaatagga
gcggttcaaaaagcaatcaatgacgaaaataatagtatcgagttacaacaacatttattg
aatcaattatcaaaaattcccacagctccagtaagtacattacatgccttttgtctgaaa
gtcattcgcaaatactattatctgctagaaatagacccggtgtttcgtctattaacagat
gaaacagaagtcatgttacttaaagaagaggtctgggaaacacttagagaaacattatac
gaacaagaagcagaatggttttatcctttaaccgaaaatttttcaggggatcgtaacgat
gaaggattaactcgtatgatcttttcaatgtatgagttctcacgagctaatcccaaccct
gatcagtggttggatcatttagaaattttatatgaaacaaccgataatttaggagattta
cctatttatcaatcttatttgaagccagtcatcataaaagagctaacagaagcgctaaat
cgtggacgtgaggcggtagctagtattgagggcgaaccgcaattagaaaaacctttagcg
atattacgagaagaaacgctatggattgaacagttatatgaattgtttttggcgaatcaa
ttggaagatgtttatcacttacttcaaggaatcaagtataaaacatatagtggacctaga
ggaaaagaagttgatccattaataaaggaagcctttgaagggacaaaagcctaccgtaat
caaaacaaagagtgggtagtcaatttaacaaaaggcctatttgcaaccgatcctaaagag
cagttgcaaatattagcaaagtctcaactttacgttcatcatttagcacagattacgaaa
caatttgccaaaaaatataaacaaagaaaagaagaaaagaacaccctagattttaatgac
ttagaacatttgacgttacaaatattgaccacatcagaggacagtaagccaaccgcttct
gtggcgagtcagtattatcgtgaacagtttaaagaggtattggtagatgaatatcaagac
attaatcagttacaagaaactattttattttggttacgatctgataatgatgaggctggt
aatttctttatggtgggtgatgttaaacaatccatttactcattcaggttagcggatcca
acgttatttataaaaaaatatacagactatgctaccgaaaaaggtggaagacgtattatt
ttagctgaaaactttcgttcacgtggtgatgttttatcgtttacgaattttattttcaga
caaataatgaatgaatcagtaggtcagcttgcgtacgacgaagaagctcgtctgatccat
ggctttacaggatttccagaagcagataattatcaaacagaaattttgatttatgaaaat
ggtgcgagtaaggacgaagaaaatgcatttgaagaaggcgaaaaagaagaactagatgaa
gcggatgactttaccattgatgataaaacagagggtgaagtaagactgataggtcaaaaa
attcatgaacttaaaacgaatggctttcaagtgtataacaaaaaagagaaaaaaatgcga
ccactcgagtttcgtgatattgtcattttaacgcctactaagaaaaataacttggtctta
ttggacttattcaaggaattagggattccgttacatgtcaatgacacacaaaattacttc
caagcaactgaagttaaaattatgttagctttattgacgattattgataatccacatcaa
gatattccgttagcatccgttttacgttcaccggttgtaggactgaaggaaaatgatcta
gcactaattagaaccacagtccctagtggcgattattatcatgcggtgcagacgattgtt
agagatgacacgttgcgtattgatcaaacattacgtgagcagttgattcgctttgaagaa
tatttagttaagtggcgtgaatcggcgcgtcgtgtgaaattagtagacttaatttggatg
gtttatcaagatacaggtttattaaattatgttgcaggactaccatcaggcaaacagcga
caagccaatttgcatgctttatacgatcgtgccatgaaatatgaacattcaagttttaaa
ggactttttcagttcattcgatttattgaaaaaatgcaacaaaaagataaagacttagca
gaaccaaatgccgtcggagaagaagaggatgcggtaagagtcatgaccattcatgcctct
aaaggtttagaatttccagtggtcttcattatggatttaaatcgtcaatttaatatgatg
gatttaagaaatcgttatgtttttgatgaaaagctaggaattggtgttaagtatttagat
aatatgacacgtcttgaaagtgtgacgttgccttatcatgttattagtcaggaaaagcgt
aaaaaattattagctgaagagatgcgtaaactatatgttgggctaacgagggcagaagaa
aagcttttcttagttgggtcgtatgaatcaaaagaaaaagcatggaagaagtggacaatg
tctgctgataattcgcaggagactattaacgatacgttacgcctacaggctaaatcgtta
ttcgattggattgggatgagcttagttagacatgaatcaatgaaagaagatgtcgcgtcg
ttagtagatgacgttcagacgttatttacagagaacgatacgacattctcactttctttt
tatcagatgaaagatttagttggacttaacgatgaaagagtagtggctgaggaaataaca
gatattccagaagttaaaacagatacagcgttagtaacgcaagctattgagcgtctaggt
tatcgttatactttcgatgcggctgtcaaaacagctagctatcaatcggtttctgaaatt
aagcgtgtctttactgatccagatgacaaacaattactgccgcttgattatattaatact
atgacggcaggagctaatcgctatgtacaaagtgagtttgctaaaccatcgttcatccaa
agtgctaaacaagtcagctatgctcaaatcggcacagcaacacatttggtcttgcagtcg
attgacttaaaaaatgatataaccgaaaggtcgattgaggatgtcatagaaacgttactt
aacaatcaagcaatagaacctgaagtggctaaacgaattaaccgtaaacagttactagct
ttctttacaacaccctttggccaatttatcagacaacatgcagaacaaacttaccgagaa
caaccattttcaatgttactgcctgctaaagaaatatacgaaggcttcccgctagataat
gaagatcgggtgttaattcatgggattattgacggctatattgaaactgagaccgagctt
attctatttgatttcaaaacagattatgtggatgtcaaaaataaacaagctgccattgaa
aaaataaagaagaactacaaaggtcagttacacttatacaaacaagcgctagaggcagaa
aaaaaacgacctgtaacggccgttcagcttgtattattagctacccaagatattattgag
ttagattaa
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