Vagococcus xieshaowenii: E4Z98_04645
Help
Entry
E4Z98_04645 CDS
T05932
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
vac
Vagococcus xieshaowenii
Pathway
vac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E4Z98_04645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vac03400
]
E4Z98_04645
Enzymes [BR:
vac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
E4Z98_04645
DNA repair and recombination proteins [BR:
vac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
E4Z98_04645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QCA28640
UniProt:
A0AAJ5JLL8
LinkDB
All DBs
Position
960065..960949
Genome browser
AA seq
294 aa
AA seq
DB search
MLIGSHVSMSGKAMLLGAAQEAASYNASTFMIYTGAPQNTRRKAVEEMNIEKGQLMMKEA
GLSHMVVHAPYIINLGNTTKPENFPFAVQFLKDEIMRAQALGGTQITMHPGAHVGAGVDA
GINQIIKGLNEVLTKEQVPQIALETMAGKGTEIGRSFEELARIIEGVELNEKLSVTLDTC
HIHDAGYDVTDFDAVLTEFDKIIGLDRLKVIHVNDSKNIRGAGKDRHANIGFGEIGFEAL
NRIVHHEALKDLPKILETPYVGEDKKTAKAPYKHEIEMFKEQKFNPNLLEDIQK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgttaataggatcacacgtaagtatgagcggtaaagcaatgctattaggcgctgcacaa
gaggcagcaagttataacgcaagtacatttatgatatatactggggcaccccaaaatacg
cgtcgtaaagcagttgaagaaatgaatattgaaaaaggacaattaatgatgaaagaggct
ggattaagccatatggtggtacatgcaccctatattattaatttaggcaacacaaccaag
cctgaaaactttccatttgctgttcaatttttaaaagatgaaatcatgcgtgctcaagca
ttgggaggcactcaaatcactatgcaccccggagctcatgtcggagctggagtggatgca
gggattaaccaaatcatcaaagggttaaacgaagtactgacaaaagaacaagtaccacaa
attgcattagaaacaatggccggtaaaggaacagaaattggtcgatcttttgaagaactt
gctcgcattattgaaggggtcgaattaaatgaaaagttatcagtaacattagatacgtgt
cacatacatgatgctggctatgatgtgacagacttcgatgctgtgttaacagaatttgat
aaaatcatcggattagatcgattaaaagtcattcatgtcaatgattcaaaaaatattaga
ggggccggtaaagaccgccatgctaatattggatttggagaaattggatttgaagcactt
aatcgtattgtgcatcatgaggcattaaaagatttacctaaaatattagaaacgccttat
gttggagaagataaaaaaacagcaaaagctccttataaacatgaaattgagatgtttaaa
gaacaaaaatttaacccaaatttattggaagatatccaaaaataa
DBGET
integrated database retrieval system
