Vagococcus xieshaowenii: E4Z98_05385
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Entry
E4Z98_05385 CDS
T05932
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vac
Vagococcus xieshaowenii
Brite
KEGG Orthology (KO) [BR:
vac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vac03016
]
E4Z98_05385 (truB)
Enzymes [BR:
vac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
E4Z98_05385 (truB)
Transfer RNA biogenesis [BR:
vac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E4Z98_05385 (truB)
Prokaryotic type
E4Z98_05385 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QCA28775
UniProt:
A0A4Z0DDI2
LinkDB
All DBs
Position
complement(1116055..1116978)
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AA seq
307 aa
AA seq
DB search
MDGIIALWKERGMTSHDCVFKLRKILHMKKIGHGGTLDPDVDGVLPICIGKGTKVIEYLQ
DNHKIYEGEITLGFSTTTEDVSGEIVEQVNVTAPLTVEVIDQAMSQMVGTITQIPPMYSA
VKVKGKRLYEYAREGLEVERPMRKADIFSFERTSVPVFDEEKGTQSWRFKVICGKGTYVR
TLSVDTGSILGYPAHMSDLTRTASGGLSKENALTLDEIKTLVEQKSFEFVQPIERAFDAS
FTCVDLSEEQYQLVKNGVFLSRNLIDKEVTEEEPIPVFYQGQVVGIYQVHPRKNNLLKPT
KIIRNDQ
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtggacggtattattgcattatggaaagaacgtggtatgacgagtcatgattgcgttttt
aaattacgaaaaattttacacatgaaaaaaatcggccatggaggcactctagacccagat
gttgatggtgtgttacccatttgtataggtaaaggaacgaaagttattgaatatttacaa
gataatcataaaatatacgaaggtgaaattacccttggtttttcaacaacgaccgaagat
gtttcaggtgagatagttgaacaagtcaatgtaacggctcctttaacggttgaggtaatt
gatcaagccatgagtcagatggtgggcacaatcactcaaataccaccaatgtattcagct
gtaaaagtgaagggtaaacgtttatatgaatacgctcgtgaagggttagaagtagaacgt
cctatgagaaaagcggatattttctcttttgaacgcacatcagtgccggtatttgatgaa
gaaaaaggaacacaatcatggcgttttaaagtgatttgtgggaaaggaacctatgttaga
acgttatcagtagatactggttcaattctaggttatccggctcatatgtctgatttaaca
agaaccgcaagtgggggcttatcaaaagaaaatgctttaacattagatgaaataaaaaca
ttggtagagcaaaaatcatttgaatttgttcaaccaattgaacgtgcgtttgatgcctca
tttacttgtgtggatctaagcgaggaacagtatcaattagtgaaaaatggtgtcttttta
tcaagaaatctaatcgataaggaagtaactgaagaagagccaatccctgttttttatcaa
gggcaagtagtgggtatttatcaagtacatcctagaaaaaataatctgttaaaaccaact
aaaattattagaaatgatcagtaa
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