Vagococcus xieshaowenii: E4Z98_07585
Help
Entry
E4Z98_07585 CDS
T05932
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vac
Vagococcus xieshaowenii
Brite
KEGG Orthology (KO) [BR:
vac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vac03016
]
E4Z98_07585 (truA)
Enzymes [BR:
vac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
E4Z98_07585 (truA)
Transfer RNA biogenesis [BR:
vac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E4Z98_07585 (truA)
Prokaryotic type
E4Z98_07585 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QCA29183
UniProt:
A0A4Z0D7K8
LinkDB
All DBs
Position
complement(1567761..1568498)
Genome browser
AA seq
245 aa
AA seq
DB search
MRNIKLTIEYDGRRYLGWQRLGDSEKTIQGKIESTLKQMTGEVIEITGSGRTDAGTHARG
QVANFKTTTDMTREQMLSFLNRYLPNDIVITKIEEMPERFHARYNVKGKKYSYNIWNSEV
PTALHRHTSFHVKQPLDLDKMQAACERLIGEHDFIGFSSLKKSKKSTIRTLQEISIVQHG
NLLECQFIGEGFLYNMVRIMMGTIIEIGLGKLPVEVIDEIFEKKIRQQAGETVPAHALFL
DEVYY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatattaaattaacgattgaatatgatggacgtcgctacttaggatggcaacgt
ctaggagattcagagaaaacgattcaagggaaaatcgagagtaccttgaaacaaatgaca
ggtgaagtcattgagattacgggatctggtcgaacagatgcggggacgcatgcaagagga
caagttgcaaattttaaaacaactacagatatgacccgtgagcaaatgctatcattttta
aatcgttatttacctaacgatatcgtgattacgaaaattgaagagatgccagagcgattt
catgctcgctataatgtcaaaggaaaaaaatattcctataatatttggaacagtgaagtt
cccacagccttacatcgacacacgagtttccatgtgaagcaaccattggatttggataaa
atgcaagctgcttgtgaaagattaattggtgaacatgactttattggcttttcttcattg
aaaaaatcaaaaaaatcaactattcgcacgcttcaagaaatttctattgtacaacacggg
aatttattagaatgtcaatttattggtgaagggttcttgtataatatggtacgaattatg
atgggaacaattatcgagattggtttaggtaagttaccagtggaagtgattgatgaaatt
ttcgaaaagaaaatccgtcaacaagcgggggaaacagttcctgctcatgcattgttttta
gatgaagtttactattag
DBGET
integrated database retrieval system
