Variovorax sp. EBFNA2: RZE79_00015
Help
Entry
RZE79_00015 CDS
T10564
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
vae Variovorax sp. EBFNA2
Brite
Enzymes [BR:
vae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RZE79_00015 (gyrB)
DNA replication proteins [BR:
vae03032
]
Prokaryotic type
DNA Topoisomerases
RZE79_00015 (gyrB)
DNA repair and recombination proteins [BR:
vae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RZE79_00015 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WPG37750
LinkDB
All DBs
Position
2711..5332
Genome browser
AA seq
873 aa
AA seq
DB search
MSAEENKPDVPHTEPVYTPEIQIVAPEGVVADSSYGEGAITILEGLEAVRKRPGMYIGDT
SDGTGLHHLVFEVVDNSIDEALAGHCDDIVVTIHSDNSISVTDNGRGIPTGVKMDDKHEP
KRSAAEIALTELHAGGKFNQNSYKVSGGLHGVGVSCVNALSVKLRLIVRREGKIHELEFS
RGFVQNRLLDTVNGFEVSPMKVIGDTDKRGTEVHFLPDTEIFKENNDFHYEILSKRLREL
SFLNNGVRIRLLDERTGKEDDFSGAGGVRGFVEFINKGKTVLHPNSFYAAGEKPADTYGG
IPGTHIGVEVAMQWNSGYNEQVLCFTNNIPQRDGGTHLTGLRAAMTRVINKYIEENEFAK
KAKVEVTGDDMREGLCCVLSVKVPEPKFSSQTKDKLVSSEVRAPVEDIVGRLLTDYLQER
PNDAKIICGKIVEAARAREAARKAREMTRRKGVLDGMGLPGKLADCQEKDPALCEVYLVE
GDSAGGSAKQGRDRKFQAILPLRGKILNVEKARYEKLLTSNEILTMITALGTGIGRAGAT
TAGGGADDFNVAKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELVERGHIYIAQPPL
YKVKVGKEEQYLKDGPALDAFLLKVALKDASIETGGAASTTLSGDTLAELARKHQVAEAV
IARLRNFMDAEALRAIADGVALDLDTPPAAEASAVALQAKLRELNTTGVPAEVSSEFDAR
TDKPLLRISRRHHGNIKSSVITQDFVHGADYAALAEAANTFRGLLSTEGALVKRGEGERG
KEEKVDDFRQAMKWLIGEAERATSRQRYKGLGEMNPEQLWETTMDPTVRRLLRVQIDDAI
EADRVFTMLMGDEVEPRREFIEQNALRASNIDV
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgaagaaaacaagcccgacgtgccgcacaccgagccggtctacacccccgaa
atccagatcgtggcgcccgaaggcgttgtcgccgactccagttatggcgaaggcgcgatc
acgatcctcgaaggtctggaagccgtgcgcaagcgcccgggcatgtacatcggcgacacc
tccgacggcacgggccttcaccatttggtgttcgaagtggtcgacaactccatcgacgaa
gcgctcgcaggccattgcgacgacatcgtcgtgaccatccactccgacaactcgatctcc
gtcaccgacaacggccgcggcatcccgaccggcgtgaagatggacgacaagcacgagccc
aagcgctcggccgctgaaattgcgctcaccgaactgcacgccggcggcaagttcaaccag
aacagctacaaggtctcgggcggcctgcacggcgtgggcgtgtcgtgcgtgaacgcgctg
agcgtgaagctgcgcctcatcgtgcgtcgcgaaggcaagatccacgagctcgaattcagc
cgcggcttcgtgcagaaccgcctgctcgacaccgtgaacggcttcgaggtctcgcccatg
aaggtcatcggcgacaccgacaagcgcggcaccgaagtgcacttcctgcccgacacggaa
atcttcaaggaaaacaacgatttccactacgagatcctgagcaagcgcctgcgcgagctg
agcttcctgaacaacggcgtgcgcatccgcctgctcgacgagcgcaccggcaaggaagac
gacttctccggcgccggcggggtgcgcggcttcgtggagttcatcaacaagggcaagacc
gtcctgcacccgaactcgttctacgcagcgggcgagaagccggccgacacctacggcggc
atccccggcacgcacatcggcgtcgaagtggcgatgcagtggaacagcggctacaacgag
caggtgctgtgtttcaccaacaacatcccgcagcgtgacggcggcacccacctcacgggc
ctgcgcgccgcgatgacccgcgtcatcaacaagtacatcgaagagaacgagttcgccaag
aaggcgaaggtcgaggtcaccggcgacgacatgcgcgaaggcctgtgctgcgtgctgagc
gtgaaggtgcccgagcccaagttctccagccagaccaaggacaagctggtctccagcgaa
gtgcgcgcgccggtggaagacatcgtcggccgcctgctcaccgactacctgcaggagcgt
ccgaacgacgccaagatcatctgcggcaagatcgtcgaggccgcccgcgcccgcgaagcg
gcccgcaaggcccgcgaaatgacgcgccgcaagggcgtgctcgacggcatgggcctgccc
ggcaagctggccgactgccaggaaaaggaccccgccctgtgcgaggtctacctcgtggag
ggcgactccgccggcggctccgccaagcagggtcgcgaccggaagttccaggccatcctg
ccgctgcgcggcaagatcctgaacgtcgagaaagcgcgctacgagaagctgctcaccagc
aacgaaattctcacgatgatcaccgcgctgggcaccggcatcggccgcgccggcgcgacc
acggcgggcggcggcgcggacgacttcaacgtcgccaagctgcgctaccaccgcatcatc
atcatgaccgacgccgacgtggacggcgcgcacatccgcacgctgttgctcacgttcttc
taccggcagatgcccgagctggtcgagcgcggccacatctacatcgcgcagccgccgctg
tacaaggtcaaggtcggcaaggaagagcagtacctgaaggacggccccgcgctcgacgcc
ttcctgctcaaggtggcgctgaaagacgcgagcatcgagaccggcggcgccgcctcgacc
acgctgtcgggcgacacgctggccgagctggcgcgcaagcatcaggtggccgaggccgtg
attgcgcgcctgcgcaactttatggacgccgaagcgctgcgcgccatcgccgacggcgtg
gcgctcgacctcgacacgccgcccgccgccgaggcctcggccgtggcactgcaggccaag
ctgcgcgagctcaacacgaccggtgtgccggccgaggtaagcagcgagttcgacgcccgc
accgacaagccgctgctgcgcatcagccgccgccaccacggcaacatcaagtccagcgtg
atcacgcaggacttcgtgcacggcgccgactacgcggcactggccgaagccgccaacacc
ttccgcggtctgctgagcaccgaaggcgcgctggtcaagcgcggcgaaggcgagcgtggc
aaggaagaaaaggtcgacgacttccgccaggccatgaagtggctgatcggcgaagccgaa
cgcgccacctcgcgccagcgctacaagggtctgggcgagatgaaccccgagcagctgtgg
gaaaccaccatggacccgaccgtgcgccgcctgctgcgcgtgcagatcgacgatgcgatc
gaagccgaccgcgtgttcacgatgctgatgggcgacgaggtggaaccgcgccgcgagttc
atcgagcagaacgcgctgcgcgcgtcgaacatcgacgtctga
DBGET
integrated database retrieval system
