Variovorax sp. EBFNA2: RZE79_00490
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Entry
RZE79_00490 CDS
T10564
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
vae Variovorax sp. EBFNA2
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vae03000
]
RZE79_00490
Transcription factors [BR:
vae03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
RZE79_00490
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GFIT
Motif
Pfam:
TetR_N
TetR_C_43
TetR_C_44
TetR_C_13
TetR_C_6
TetR_C_21
Motif
Other DBs
NCBI-ProteinID:
WPG37841
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Position
101012..101659
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AA seq
215 aa
AA seq
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MTEPDPPGRRERRRTHTLDHVASTAMRLFEAQGYDATTMEQIAQQSDVAKGTLYNHFPTK
EAILAHWVHLELVVDAQRLHASIDPKAGFTAQLTGLLDASAEWSERYRVYLLDYFRFRFL
NIESELGGGGDRSTPRDLSGLFEALIAAAQQAGTLRTDVSAAHLASLLHHLYFGALMRWL
TLPGLVLRDEFAVVVDLFVGGARPAPKPAARRRTS
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaacccgatccccccggccgccgcgagcgccgccgcacccacacgctcgaccac
gtcgcgtccaccgccatgcgcctgttcgaagcccagggctacgacgcgaccaccatggag
cagatcgcgcagcagtccgacgtggccaagggcacgctctacaaccacttcccgaccaag
gaagcgatcctggcgcactgggtgcacctcgagctcgtggtcgatgcgcagcgcctgcac
gcgtcgatcgacccgaaggcgggtttcacggcgcagctcaccggcctgctcgatgcctcg
gccgaatggtccgagcgctaccgggtctacctgctcgactacttccgctttcgctttctc
aacatcgagagcgaactcggcggcggtggcgaccgcagcacgccgcgcgacctgtcgggg
ctgttcgaggcgctcatcgcagccgcccagcaagccggcacgctgcgcaccgacgtgtcg
gccgcgcacctcgcgagcctgctgcaccacctgtacttcggcgcgctgatgcgctggctc
acgctgcccggcctcgtgctgcgcgacgagttcgccgtggtcgtcgaccttttcgtcggc
ggcgcacggccagcccccaaacccgctgcgaggaggcgcacctcatga
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