Variovorax sp. EBFNA2: RZE79_02085
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Entry
RZE79_02085 CDS
T10564
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
vae Variovorax sp. EBFNA2
Pathway
vae02010
ABC transporters
vae02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RZE79_02085
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RZE79_02085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vae02000
]
RZE79_02085
Transporters [BR:
vae02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RZE79_02085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Toprim_2
Toprim_3
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
WPG38143
LinkDB
All DBs
Position
complement(451633..452679)
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AA seq
348 aa
AA seq
DB search
MRRNFLKSAAAAGIGLAGASAFAQQQSAAPAAGAGLRGNASDVYVMNVMVSGVEYWFPVY
EMMKQLGRTLGVRTRYTGTPEYDVNKQLASFEQELARKPAGILLHPMNPDPFIEPINRAA
AMGIPVVTFAADSPNSKRTSFITSDNDREGNQAADAIAASLNGKGEYAVLENPGQDNHDR
RISAFVNRMKAKHPGMKLVGRAASNQDPNKAYQAVLSLAQANPNLGALFMPEANSALGAA
QAKVETKKNIKVMCCDVNAKILDMIKSGDVFGAINPNQGMQGYMGMMMLFLAKNPGLIDP
MNDAKRNGTNPMAVPFLDNGLAVVSKANADDFYWDKYLARRGTKGIGE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgtaatttcctgaagtccgcggccgctgccggtatcggcctggccggtgcgagc
gcgttcgcgcagcaacagtccgcagcccctgcggcaggtgccggcctgcgcggcaatgcc
agcgacgtctacgtgatgaacgtgatggtctcgggcgtcgagtactggttcccggtctac
gaaatgatgaagcagctcggccgcacgctgggcgttcgcacccgctacaccggcacgccg
gagtacgacgtgaacaagcagctcgcttcgttcgaacaggaactggcgcgcaagcccgcc
ggcatcctgctgcacccgatgaaccccgatccgttcatcgaacccatcaaccgcgccgcc
gcgatgggcatcccggtcgtgaccttcgcggccgactcgccgaactccaagcgcacctcg
ttcatcacctccgacaacgaccgcgaaggcaaccaggccgccgacgccatcgccgcctcg
ctgaacggcaagggcgagtacgccgtgctcgagaacccgggccaggacaaccacgaccgc
cgcatctccgcgttcgtgaaccgcatgaaggccaagcacccgggcatgaagctggtcggc
cgcgccgccagcaaccaggacccgaacaaggcctaccaggccgtgctgagcctggcgcag
gccaacccgaacctgggcgcgctgttcatgcccgaagccaactcggcgctcggcgctgcg
caggccaaggtcgagaccaagaagaacatcaaggtgatgtgctgcgacgtcaacgccaag
atcctggacatgatcaagtcgggcgacgtgttcggcgccatcaacccgaaccagggcatg
cagggctacatgggcatgatgatgctgttcctggccaagaacccgggcctcatcgatccg
atgaacgacgccaagcgcaacggcaccaacccgatggccgtgcccttcctggacaacggc
ctggccgtggtcagcaaggccaacgccgacgacttctactgggacaagtacctcgcccgc
cgtggcaccaagggaatcggcgagtga
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