Variovorax sp. EBFNA2: RZE79_02160
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Entry
RZE79_02160 CDS
T10564
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vae Variovorax sp. EBFNA2
Pathway
vae00061
Fatty acid biosynthesis
vae00071
Fatty acid degradation
vae01100
Metabolic pathways
vae01212
Fatty acid metabolism
vae02024
Quorum sensing
vae04146
Peroxisome
Module
vae_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RZE79_02160
00071 Fatty acid degradation
RZE79_02160
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RZE79_02160
09145 Cellular community - prokaryotes
02024 Quorum sensing
RZE79_02160
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vae01004
]
RZE79_02160
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vae04147
]
RZE79_02160
Enzymes [BR:
vae01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RZE79_02160
Lipid biosynthesis proteins [BR:
vae01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RZE79_02160
Exosome [BR:
vae04147
]
Exosomal proteins
Exosomal proteins of breast milk
RZE79_02160
Exosomal proteins of breast cancer cells
RZE79_02160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
WPG38156
LinkDB
All DBs
Position
complement(471269..472885)
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AA seq
538 aa
AA seq
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MATLSSDDPTPWTRNYPPGMRWDAELPVKPVQQMLDEAVARWPDHSAVEFMGQSLSYRQL
GEAVDRAAKGLQDLGVKPGVHVGLYLPNTPHYPIAFFAVLKAGGTVVNYSPLDAERVLAH
KIEDSRTDILVTLDLVNLYPLMARLLDSSRLKTLVVGSLGDYGAAGDKVQAQLQAAGQIA
PVPVDARHVRFTDLLQSEGTHQTYPLGDLTEEIVVLQYTGGTTGLPKGAMLTHANLTSAS
AQYYESTRGEPPILVEGGERFLVVLPLFHIFALSAAMLLGVRLGAALVLHTRFDVDAVMN
ELAASKISVFPGVPTMYTAILSHPKAKEMDLRSLKFCGSGGAPLPVEVEQRFFELTGCHL
NEGWGMTETSPVGTFTPARGVRKAGSCGMPLPRVRIKLVSLDDPTKDVTAFGEPGELCVQ
GPNVMKGYWNNPKATAESMTADGYFRSGDVAKMDADGYLYIVDRTKDMLLCGGYNVYPRV
LEEAVYEHPSVAEVCVIGVPDEYRGQSPKAFVKLKDGAEELTLDTLKSFLKNRLGKHR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctttcctcggacgaccccaccccctggacgcgcaactacccgcccggcatg
cgctgggacgccgagctgcccgtcaagccggtgcagcagatgctcgatgaggcggtcgcg
cgctggcccgaccattcggccgtcgagttcatgggccagtcgctcagctaccgccagctt
ggcgaggcggtcgaccgtgccgccaagggcctgcaggacctgggcgtgaagccgggcgtg
catgtcggcctctacctgccgaacacgccgcactaccccatcgccttcttcgccgtgctg
aaagccggcggcacggtggtgaactactcgccgctcgacgccgagcgcgtgctggcccac
aagatcgaggacagccgcaccgacatcctcgtcacgctcgacctcgtgaacctctacccg
ctgatggcgcgcctgctcgacagctcgcgcctgaagacgctggtggtcggcagcctcggc
gactacggcgcggcgggcgacaaggtgcaggcccagctgcaggccgcaggccagatcgcg
cccgtgccggtggacgcgcgccacgtgcgcttcaccgacctgctccagagcgaaggcacg
caccagacctacccgctcggcgacctgaccgaagagatcgtggtgctgcagtacaccggc
ggcaccaccggcctgcccaagggcgcgatgctcacgcacgccaacctcacgtcggcctcg
gcgcagtactacgaatcgacgcgcggcgagccgccgatcctggtcgagggcggcgagcgc
ttcctggtcgtgctgccgctgttccacatcttcgcgctcagcgccgcgatgctgctgggc
gtgcgcctgggtgcggcgctggtgctgcacacgcgcttcgatgtcgacgcggtgatgaac
gaactcgcggccagcaagatcagcgtcttccccggcgtgccgaccatgtacaccgccatc
ctttcgcaccccaaggccaaagagatggacctgcgctcgctgaagttctgcggctcgggc
ggcgcgccgctgccggtggaggtggagcagcgcttcttcgaactcaccggctgccacctc
aacgaaggctggggcatgaccgagacctcgcccgtgggcaccttcacgcccgcgcgcggc
gtgcgcaaggccggctcgtgcggcatgccgctgccgcgcgtgcgcatcaagctcgtgagc
ctggacgatccgaccaaagacgtgaccgcgttcggcgaacccggcgagctgtgcgtgcag
ggcccgaacgtcatgaagggctactggaacaacccgaaggccaccgccgagtcgatgacg
gccgacggctacttccgcagcggcgacgtcgcgaagatggacgccgacggctacctgtac
atcgtcgaccgcaccaaggacatgctgctgtgcggcggctacaacgtgtacccgcgcgtg
ctcgaggaggcggtgtacgaacacccgtcggtggccgaggtctgcgtgatcggcgtgccc
gacgaataccgcgggcagtcgccgaaagccttcgtgaaactgaaagacggcgcggaagaa
ctcacgctcgacacgctcaagtctttcctcaagaaccgcctgggcaagcacagatga
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