KEGG   Variovorax sp. EBFNA2: RZE79_02810
Entry
RZE79_02810       CDS       T10564                                 
Name
(GenBank) DotU family type VI secretion system protein
  KO
K11892  type VI secretion system protein ImpK
Organism
vae  Variovorax sp. EBFNA2
Pathway
vae03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vae00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RZE79_02810
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vae02044]
    RZE79_02810
Secretion system [BR:vae02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   RZE79_02810
SSDB
Motif
Pfam: DotU OmpA
Other DBs
NCBI-ProteinID: WPG38281
LinkDB
Position
625875..627230
AA seq 451 aa
MSTPPDPFAAFESERTVIKPKPRTPGGAPPAAAAPAPFFGGADPTPVAEVGEIGLLNPLV
SAAGKLLVLIGKLRNLAQPPNVPALRASTADAVNQFDAAARRAGVGNESVLAARYVLCTA
LDEAVANTPWGVQAGWNKQSLLVQFHNETWGGEKVFQLLAKLAQDVPTHRQLLELIYSVL
ALGFEGRYRVVDNGRAQLDSVRQRLADLIAKDRPAVEPELSPHWRGQGAGTVRLRESLPL
WVFAAGFALLLALAWFGLRLTLNHRSDTTYAAVSSLRVPNIQIAPPAAPAKSPRLARFLE
PEIKQGLVTVTDEADRSVVRLRGDSFFGSGSAEPMAASLPVLRRIGQALAEVKGEVLITG
HSDNQPIRSLRYPSNWHLSAARADAVKGALTTLVDPARMRSDGKADAEPVVANDTPANRA
RNRRVDIVLLTEPERVAAAAAPAAPVPGATK
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagtacccctcccgacccctttgccgccttcgagtccgagcgcacggtcatcaagccc
aagccgcgcacgccgggcggcgcaccgccggctgctgcggctcccgcgccgttcttcggc
ggtgccgatccgacgcccgtggccgaggtgggcgagatcggcctgctcaatccgctggtc
tcggccgcgggcaagctgctggtgctgatcggcaagctgcgcaacctcgcgcagccgccc
aacgtgccggcgctgcgcgcgtccaccgccgatgcggtgaaccagttcgatgccgcggcg
cgccgtgcgggcgtgggcaacgagtcggtgctggccgcacgctacgtgctgtgcacggcg
ctcgacgaggccgtcgccaacacgccctggggcgtgcaggccggatggaacaagcagagc
ttgctggtgcagttccacaacgagacctggggcggcgaaaaggtgttccagctgctcgcc
aagctcgcacaggacgtgcccacgcaccgccagttgctcgagttgatctacagcgtgctc
gcgctcggcttcgagggccgctaccgcgtggtcgacaacggccgcgcgcagctcgactcg
gtgcgccagcgcctggccgacctgatcgccaaggaccgtccggccgtcgagcccgagctg
tcgccgcattggcgcgggcagggcgcgggcacggtgcggctgcgcgagtcgctgccgctg
tgggtgttcgcggccggcttcgcgctgctgctggcgctcgcatggttcggcctgcggctc
acgctcaaccaccgctccgacaccacgtacgcggccgtgtcgagcctgcgcgtgcccaac
atccagatcgcaccacccgccgcgccggccaagtcgccgcggctcgcgcgttttctcgag
cccgagatcaagcaaggcctggtgacggtgaccgacgaggccgaccgcagcgtggtgcgg
ctgcgcggcgactcgttcttcggctcgggcagcgccgagccgatggccgcgtcgctgccg
gtgctgcgccgcatcggccaggcgctggccgaggtgaagggcgaggtgctcatcaccggc
cactccgacaaccagccgatccgctcgctgcgctatccgtcgaactggcacctgtcggcc
gcgcgcgccgatgcggtgaagggcgcgctgaccacgctggtcgatcccgcgcgcatgcgt
tccgacggcaaggccgacgccgagcccgtggtggccaacgacacgccggccaaccgcgcg
cgcaaccgccgcgtcgacatcgtgctgctgaccgaacccgagcgcgtggctgctgctgcc
gcacccgccgctcccgtccccggagcgacgaaatga

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