KEGG   Variovorax sp. EBFNA2: RZE79_02865
Entry
RZE79_02865       CDS       T10564                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
vae  Variovorax sp. EBFNA2
Brite
KEGG Orthology (KO) [BR:vae00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vae02044]
    RZE79_02865 (tssF)
Secretion system [BR:vae02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   RZE79_02865 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: WPG38292
LinkDB
Position
642029..643921
AA seq 630 aa
MDPRLLSLYEQELRYFRESAAEFARAFPKIAHRLGIEGQEVADPYVERLIEATAFLSARV
GLKLDAEYPRFTGHLLDIVYPHFLAPTPAMTVVSFVPDPEDANLAAGPTLPRGAGLRARQ
AVGQNTHCEFRTAAALRIWPIEVQRAQYFTYAPDLPLNTHPQSRAIRGGLRIALRATAGL
DFSQIALDDLVLHFGGAEDVAWQLHECALGQPIGVWVRPLTAGGALQGTARSLPGSAIGA
VGFADDEALLPVTATGFSGFRLLQEYFAFPQRFQFVRIGGLQALLATMPVTDIEIVLLFS
RGDAALEKLVSADNVQLHCVPAVNLFTKRLDRVPVTEGVSQFHLVPDRTRPQDFEVHTVT
EVIGHGAPGADAAVAEQPFRPFYSAFHGSRNSHPAYFTTTREPRMLSVRQRTEGHRSSHI
GSEVYMQIVDPQQAPYAATLRQLAVTALCTNRDLPLLMPLGRENDFDCVDSFPVQRVRMV
RGPSRPVSPVVSQGLGWRVVDHLALNYLSLSDSTPEQGAAALRETLMLYAVHADEMRQGQ
VRGLLSVKSKSVARRLPLAGPIAFGRGLEVTLEVDKDAFHGHSAFLFGAVLAQFLARHVE
VNHFVETVLRVAGKGEAMRWRPLCGTRQIL
NT seq 1893 nt   +upstreamnt  +downstreamnt
atggaccctcggctgctgagcctgtacgagcaggaactgcgctacttccgcgaaagcgcc
gccgagttcgcgcgcgcctttccgaagatcgcgcaccgcctgggcatcgaaggccaggaa
gtcgccgacccgtacgtggagcgcttgatcgaggccacggcctttctctcggcgcgcgtg
ggcctgaagctcgacgccgaatacccgcgcttcacgggccatctgctcgatatcgtctac
ccgcacttcctggcgcccacgccggccatgacggtggtgtcgttcgtgcccgacccggaa
gacgccaacctcgcggccggccccacgctgccgcgcggtgccggcctgcgcgcgcgccag
gccgtggggcagaacacgcactgcgagttccgcaccgccgccgcgttgcgcatctggccg
atcgaggtgcagcgcgcccagtacttcacctatgcgcccgacctgccgctgaacacgcac
ccgcaatcgcgcgccatccgcggcggcctgcgcatcgcgttgcgcgccacggcgggtctg
gacttcagccagatcgcgctcgacgacctggtgctgcatttcggtggcgcggaagacgtg
gcctggcagctgcacgaatgcgcgctgggccagcccatcggcgtgtgggtgcgaccgctc
acggccggtggtgccttgcagggcaccgcgcgcagcctgccgggcagcgccatcggcgcg
gtcggcttcgcggacgacgaggccctgctgccggtcacggccacgggcttctcgggcttc
cggctgctgcaggagtacttcgcgtttccgcagcgcttccagttcgtgcgcatcggcggg
ctgcaggcgctgctcgcgacgatgccggtgaccgacatcgagatcgtgctgctgttctcg
cgcggcgacgcggcgctcgagaagctggtgagcgccgacaacgtgcagctgcactgcgtg
cccgccgtcaacctgttcaccaagcggctcgaccgcgtgcccgtgaccgaaggcgtgagc
cagttccacctcgtgcccgaccgcacgcggccgcaggacttcgaggtgcacaccgtcacc
gaggtcatcggccatggggcgcccggtgccgacgccgcggtggccgagcagccgttccgg
ccgttctactcggccttccacggcagccgcaacagccacccggcctacttcacgaccacg
cgcgagccgcgcatgctctcggtgcgccagcgcaccgaaggccaccgcagcagccacatc
ggctccgaggtctacatgcagatcgtcgacccgcagcaggcgccgtatgccgccacgctg
cgccagctcgccgtgaccgcgctgtgcaccaaccgcgacctgccgctgttgatgccgctg
ggccgcgagaacgacttcgactgcgtcgattcctttcccgtgcagcgcgtgcgcatggtg
cgcgggccgtcgcggccggtgtcgccggtcgtgagccaggggctgggctggcgcgtggtg
gaccacctggcgctcaactacctgtcgctgtccgacagcacgccggagcagggcgccgcc
gcgttgcgcgagacgctcatgctctacgccgtgcatgccgacgagatgcgccagggccag
gtgcgcgggctgctgtcggtgaagagcaagtccgtcgcgcggcgcctgccgctcgcgggt
ccgatcgctttcgggcgtgggctcgaagtgacgctcgaggtcgacaaggacgccttccac
ggccacagcgccttcctgttcggcgccgtgctcgcgcagtttctggcgcgccatgtcgag
gtgaaccacttcgtcgagaccgtgctgcgcgtcgcgggcaagggcgaagccatgcgctgg
aggccgctgtgcgggacacgacagattctgtga

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