Variovorax sp. EBFNA2: RZE79_03110
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Entry
RZE79_03110 CDS
T10564
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
vae Variovorax sp. EBFNA2
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vae03009
]
RZE79_03110 (rsmB)
Enzymes [BR:
vae01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
RZE79_03110 (rsmB)
Ribosome biogenesis [BR:
vae03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RZE79_03110 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
FtsJ
Motif
Other DBs
NCBI-ProteinID:
WPG38335
LinkDB
All DBs
Position
698725..700113
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AA seq
462 aa
AA seq
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MPADLSSDPSSGSASSAPQQPPLWRQLQLTAGALASIRAGTSGTVAFEAVEPALRPGVQA
LGFQVLRWLGRAEALRRHLAKRTPPPLPDALLCTALALAWHSDHAPYEPFTLVDQAVEAA
KRNPATRAQASFINACLRRFLRERDELVAATDSEPVAQWNHPRWWIERLKRDHPRDWQRV
LSADNAQAPMTLRVNALQSTPAAYLLELEAVGLGATRVGADGLQLTRARPVLQLPGFADG
ACSVQDAAAQLAAPLLLDGLLPATPGAAPLRVLDACAAPGGKTAHLIERAGTHAIEVTAL
EVDGVRSRRIDETLARLGLKAKVVVADAGRPADWWDGVLFDAILLDAPCTASGIVRRHPD
VRWLRRESDTAQLATQQATLLAALWPLVRPGGRLLYCTCSVFREEGSQQIDAFLVRNTDA
RLLPSPGHLLPQSGANARGVPDNPSGDHDGFFYALLEKPAPH
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgccagcagatctttcctccgacccctcttcgggcagcgcctcctcggcgccgcaacaa
ccgccgctctggcgccaactgcaactgaccgcgggggcgctggcgtcgattcgcgccggc
acctcgggcaccgtcgcgttcgaggccgtcgagcctgcgctgcgccccggcgtgcaggcc
ctgggcttccaggtgctgcgctggcttggccgcgccgaggcgctgcgccgccacctggcc
aagcgcacgccgccgccgttgcccgacgccttgctgtgcaccgcgctcgcgctggcctgg
cacagcgaccacgcgccctacgagcccttcacgctggtcgaccaggctgttgaggctgcc
aagcgcaacccggcgacgcgggcgcaggccagcttcatcaacgcctgcctgcgccgcttc
ctgcgcgagcgcgacgaactcgtggcggccaccgacagcgaaccggtcgcgcagtggaac
cacccgcgctggtggatcgaacgcttgaagcgcgaccatccgcgcgactggcagcgtgtg
ctgtcggcagacaacgcccaggcgccgatgaccctgcgcgtcaacgcgctgcaatcgacg
ccggcggcctacctgctggaactcgaggctgtaggcctcggcgccacgcgcgtcggcgcc
gatggcttgcagctcacgcgggcccggccggtgctgcagctgcccggtttcgccgacggc
gcctgctccgtacaggacgccgccgcgcaactcgccgcgcccttgctgctcgacggcctg
ctgccggccacgcccggcgccgcgccgctgcgtgtgctggatgcctgcgccgcccccggt
ggcaagaccgcgcacctgattgaacgggccggcacccacgccatcgaagtgacggcgctg
gaggtcgatggcgtgcgcagccgccgcatcgacgaaacgctcgcccgcctcggcctgaag
gccaaggttgtggtggccgatgccggccgccccgccgactggtgggacggcgtgctgttc
gacgccatcctgctggacgcgccgtgcactgcctcgggcatcgtgcggcgccatcccgac
gtgcgctggctgcgccgcgagagcgacaccgcccagttggcgacccagcaggcgacgctg
ctggccgcgctctggccgctggtgcggcccggcggccggctgctttactgcacctgttcc
gtgttccgcgaagaaggctcgcaacaaattgatgcgtttcttgtacgcaacaccgacgcc
cgattgctgccgtccccgggacacttgctgcctcaaagtggggcgaatgcccgtggcgtc
ccggacaatccctctggtgaccacgacggcttcttctacgccctgcttgaaaaacccgcg
ccgcactga
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