Variovorax sp. EBFNA2: RZE79_03250
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Entry
RZE79_03250 CDS
T10564
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vae Variovorax sp. EBFNA2
Pathway
vae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RZE79_03250 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vae03400
]
RZE79_03250 (priA)
Enzymes [BR:
vae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RZE79_03250 (priA)
DNA repair and recombination proteins [BR:
vae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RZE79_03250 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_3primeBD
PriA_C
Helicase_C
Zn_ribbon_PriA
AAA_30
ADDB_N
Glycos_transf_2
T2SSE
AAA_19
UvrD-helicase
DUF5817
TrwB_AAD_bind
nSTAND_NTPase5
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WPG38361
LinkDB
All DBs
Position
complement(729171..731246)
Genome browser
AA seq
691 aa
AA seq
DB search
MQTPAHAALGDLLSYAGAEPLVPGTLVRVPLGKREVLGVVWNEPTSLEGAEPDMALKPVG
AALDALAPLGEAWRDLVAFAGRYYQRSIGEIALAALPPQLRDLSTTQLARRLKRKTTTGP
VAETAESANLIALSEEQAAALARIEAETGTFLLVGSTGSGKTEVYLRCVADLLARDPEAQ
ALVMVPEINLTPQLEARFKARFGDEAVVSLHSGMTNPQRLASWLAAHGGAARIVLGTRMA
VFASIPGLKLIVVDEEHDPSYKQQEGARYSARDLAVWRGQREKAKVILGSATPSLESWHQ
SRPPEGDDPGGRYVRLAMPSRIGAGALPAVRLVDMNLQPPKTVISGALLDAIGQRIARGE
QSMIFLNRRGYAPVLACGDCGWKSECPHCSAYRVFHKIDRTLRCHHCGFTERVPRACPAC
GNPDIAPVGRGTERLEEHLAELFAAVKHADGSAVRIARIDADSTKKQGALESQLAAVHAG
EVDVLVGTQMIAKGHDFRRITLVAAVNPDGALFSSDFRAPERLFSLLMQSAGRAGRDAAY
LAAQGTKAEMWIQTHHAPHPLFAALRRHDYEAFAKQQLEERQAAAMPPFAFQALLRADAR
EQAVAQGFLNLAADKAEALPGADLVTRYPAVPLAIQRVANVERAQMLIESPSRAALQRLL
AAWQPLLHELRRTPEGKGVIRWLVDVDPHSI
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacgcccgcgcatgctgctttgggtgacctgctgagctacgccggcgccgagccg
ctggtgccgggcacgctggtgcgggtgccgctgggcaagcgcgaagtgctgggcgtggtc
tggaacgagccgacctcgctggaaggcgccgagcccgacatggcgctcaaacccgtcggc
gccgcgctcgacgcgctggcgccgctgggcgaggcctggcgcgacctcgtggcctttgcc
gggcgctactaccagcgctcgatcggcgagatcgcactggccgccctgccgccgcagctg
cgcgacctgagcacgacgcagctggcgcgccgcctcaagcgcaagaccacgaccggtccg
gtggccgagaccgccgagtccgcgaacctgatcgccctctccgaagagcaggcggccgcg
ctggcccgcatcgaggccgagaccggcaccttcctgctggtgggcagcaccggcagcggc
aagaccgaggtctacctgcgctgcgtggccgacctgctcgcgcgcgaccccgaggcgcag
gcgctggtgatggtgcccgagatcaacctcacgccgcagctcgaagcgcgcttcaaggcc
cgcttcggcgacgaggccgtggtgtcgctgcacagcggcatgaccaacccgcagcggctc
gcgagctggctggcggcgcacggcggcgcggcgcgcatcgtgctgggcacacgcatggcg
gtgttcgcgtcgattccggggctcaagctcatcgtggtcgacgaagagcacgaccccagc
tacaagcagcaggaaggcgcgcgctactcggcacgcgaccttgccgtgtggcgcggccag
cgcgaaaaagccaaggtgatcctcggctcggccacgccctcgctcgagagctggcatcag
agccggccgcccgagggcgacgacccgggcgggcgctacgtgcggctggccatgccttcg
cgcatcggcgcgggcgcgctgccggcggtgcggctggtcgacatgaacctgcagccgccg
aagacggtgatctcgggcgcgctgctcgacgccatcggccagcgcatcgcgcgcggcgag
cagagcatgatcttcctgaaccggcgcggctatgcgccggtgctggcctgcggcgactgc
ggctggaagagcgaatgcccgcactgcagcgcgtaccgcgtgttccacaagatcgaccgc
acgctgcgctgccaccactgcggtttcaccgagcgcgtgccgcgcgcctgcccggcctgc
ggcaaccccgacatcgcgcccgtgggccgcggcaccgagcggctcgaagagcacctggcc
gagctgttcgccgccgtgaagcacgccgacggcagcgcggtgcgcattgcgcgcatcgac
gccgacagcaccaagaaacagggcgcactcgaatcgcagctcgcggccgtgcacgcaggc
gaggtcgatgtgctcgtcggcacacagatgatcgccaagggccacgacttccgccgcatc
acgctggtggccgcggtgaaccccgacggcgcgctgttctccagcgacttccgcgcgccc
gagcgcttgttcagcctcttgatgcaatcggccggccgcgcaggccgcgatgccgcctac
ctcgcggcgcaaggcaccaaggccgagatgtggatccagacgcaccacgcgccgcacccg
ctgttcgcggcgctgcgccggcacgactacgaagccttcgccaagcagcagctcgaagag
cgccaggccgccgccatgccgccttttgcgttccaggcgctgctgcgcgccgacgcgcgc
gagcaggccgtggcacagggctttttgaacctcgcggccgacaaggccgaggcgctgccc
ggcgccgacctcgtcacgcgctacccggcggtgccgctggcgatccagcgcgtggcgaac
gtggagcgcgcgcagatgctcatcgaaagcccgtcacgcgcggcgctgcaacgcctgctg
gccgcctggcagccgctgctgcacgagctgcggcgcacgcccgagggcaagggcgtgatc
cgctggctggtggacgtggacccgcacagcatctga
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