Variovorax sp. EBFNA2: RZE79_03535
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Entry
RZE79_03535 CDS
T10564
Symbol
slmA
Name
(GenBank) nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
vae Variovorax sp. EBFNA2
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vae03000
]
RZE79_03535 (slmA)
03036 Chromosome and associated proteins [BR:
vae03036
]
RZE79_03535 (slmA)
Transcription factors [BR:
vae03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
RZE79_03535 (slmA)
Chromosome and associated proteins [BR:
vae03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
RZE79_03535 (slmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
TetR_C_6
HTH_20
TetR
HTH_11
EcoEI_R_C
PEP-utilisers_N
TetR_C_25
YLR146W-A
HTH_5
Tfb2_C
TetR_C_15
Motif
Other DBs
NCBI-ProteinID:
WPG38416
LinkDB
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Position
796461..797111
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AA seq
216 aa
AA seq
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MQNEETAAPGVETPAETPAAVPTRKRPKPGERRVQILQALAAMLEQPGAERVTTAALAAR
LEVSEAALYRHFASKAQMFEGLIDFIEQSVFTLVNQILEREGATGSQQAARILTLLVQFA
ERNPGMTRVMVGDALVYENERLQQRMNQFFDKIEATLRQVLRGAAAADGSATPSVDAQVR
AAALTAFVVGQLQRFARSGFRRAPSEHLEATIALIV
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgaagagacagctgcccccggcgtagagaccccggccgaaacgcccgccgcc
gtaccgacgcgcaagcgccccaagccgggcgagcggcgcgtgcagatcctgcaggcgctg
gccgccatgctggagcagcccggtgccgagcgggtcaccaccgccgcgctggccgcacgg
ctcgaggtgagcgaggcggccctgtaccgccacttcgcgagcaaggcccagatgttcgaa
ggcctcatcgatttcatcgagcagagcgtcttcacgctggtcaaccagatcctcgagcgc
gaaggtgccaccggcagccagcaggccgcccgcatcctcacgctgctcgtgcagttcgcc
gagcgcaatcccggcatgacgcgcgtcatggtcggcgatgcgctggtctacgagaacgag
cgcctgcagcagcgcatgaaccagttcttcgacaagatcgaggccacgctgcgccaggtg
ctgcgcggcgcggccgccgccgacggctccgccacgcccagcgtcgatgcgcaggtgcgg
gccgcggcgctcacggccttcgtggtcgggcagctgcagcgctttgcgcgctcgggcttc
cgccgcgcgccttctgaacacctggaagccacgatcgccctgatcgtttga
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